Specifically-expressed experiments

Gene ID	At2g46430
Gene name	ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3)
Functional description	cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
36.0	99.7	GSM128685	Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
34.0	99.7	GSM128683	Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
30.0	99.7	GSM128684	Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
27.6	99.7	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
26.1	99.7	GSM133035	CT482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
24.0	99.6	GSM134385	St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
22.6	99.6	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
22.4	99.6	GSM128674	Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
21.0	99.6	GSM128648	Underwood_1-1_Cor-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
20.8	99.6	GSM128687	Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
20.8	99.6	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
20.5	99.6	GSM128673	Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
20.2	99.6	GSM128682	Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.1	99.6	GSM133737	Buchanan-Wollaston_A-9-bwoll-Co1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
18.9	99.5	GSM133064	2528	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
17.9	99.5	GSM142816	SS002_ATH1_A8-smith-14h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
17.7	99.5	GSM128649	Underwood_1-2_Cor-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
17.7	99.5	GSM133738	Buchanan-Wollaston_A-10-bwoll-Co2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
17.4	99.5	GSM269818	C2 leaf-well watered-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
17.1	99.5	GSM128686	Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
17.1	99.5	GSM133050	2791	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
16.8	99.5	GSM128670	Underwood_1-23_hrpAfliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.6	99.5	GSM133731	Buchanan-Wollaston_A-3-bwoll-C0S_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
16.5	99.5	GSM142810	SS002_ATH1_A2-smith-01h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
16.2	99.5	GSM142815	SS002_ATH1_A7-smith-13h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
16.1	99.5	GSM133735	Buchanan-Wollaston_A-7-bwoll-Ei1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
15.7	99.5	GSM133732	Buchanan-Wollaston_A-4-bwoll-C5S_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
15.6	99.5	GSM142811	SS002_ATH1_A3-smith-02h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
15.5	99.5	GSM133091	JD AT+EO COL WT EXP2 05D INFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
15.4	99.5	GSM133819	Yang_1-4_old-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
15.4	99.5	GSM131537	ATGE_25_A	GSE5630	AtGenExpress: Developmental series (leaves)
15.3	99.4	GSM142819	SS002_ATH1_A11-smith-24h_repeat	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
15.3	99.4	GSM133736	Buchanan-Wollaston_A-8-bwoll-Ei2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
14.8	99.4	GSM133090	JD AT+EO COL WT EXP2 04D UNINFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
14.6	99.4	GSM131538	ATGE_25_B	GSE5630	AtGenExpress: Developmental series (leaves)
14.5	99.4	GSM133076	JD AT+EO COL WT 05D UNINFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
14.4	99.4	GSM269828	WT leaf-well watered-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
14.2	99.4	GSM133086	JD AT+EO COL WT EXP2 02D UNINFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
14.1	99.4	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
14.0	99.4	GSM134441	St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
13.9	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467294	-	-	-
13.7	99.4	GSM134378	St.Clair_1-39_394_Est_0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
13.6	99.4	GSM142808	SS001_ATH1_A11-Smith-21B	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
13.6	99.4	GSM133089	JD AT+EO COL WT EXP2 04D INFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
13.5	99.4	GSM128664	Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.5	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
13.4	99.4	GSM131156	AtGen_C-6_3-C-12_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
13.4	99.4	GSM133074	JD AT+EO COL WT 04D UNINFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
13.4	99.4	GSM260955	A2-LLOYD-PHO_REP2	GSE10326	Transcriptome analysis of pho3
13.2	99.4	GSM134349	St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
13.1	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148666	-	-	-
13.0	99.4	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
12.9	99.3	GSM128680	Underwood_1-33_Mock-Inoculum-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.8	99.3	GSM134351	St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
12.8	99.3	GSM133046	2788	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.8	99.3	GSM94007	A1-1 first repeat	GSE4113	Arabidopsis plants with altered levels of alternative oxidase
12.8	99.3	GSM131800	Quick_A110_2-24hr_Rep2m_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
12.5	99.3	GSM133045	2787	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.5	99.3	GSM134350	St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
12.4	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
12.4	99.3	GSM133037	2508	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.2	99.3	GSM133048	2790	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.2	99.3	GSM131539	ATGE_25_C	GSE5630	AtGenExpress: Developmental series (leaves)
12.1	99.3	GSM128654	Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.0	99.3	GSM131168	AtGen_C-18_3-Pi-24_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
11.8	99.3	GSM133063	2526	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
11.7	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467312	-	-	-
11.7	99.3	GSM133081	JD AT+EO COL WT 18H INFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
11.5	99.3	GSM142843	MG001_ATH1_A24-Torres-7N6	GSE6176	Impact of Type III effectors on plant defense responses
11.4	99.3	GSM260953	A1-LLOYD-PHO_REP1	GSE10326	Transcriptome analysis of pho3
11.2	99.2	GSM128679	Underwood_1-32_Mock-Inoculum-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.2	99.2	GSM133821	Yang_1-6_old-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
11.1	99.2	GSM133041	2525	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
11.0	99.2	GSM133051	2793	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.9	99.2	ArrayExpress	E-ATMX-34-raw-cel-1563627275	-	-	-
10.9	99.2	GSM133036	CT482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
10.8	99.2	GSM269832	T8 leaf-well watered-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.7	99.2	GSM269826	C2 leaf-well watered-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.7	99.2	GSM133049	2792	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.7	99.2	GSM131154	AtGen_C-4_1-C-12_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
10.6	99.2	ArrayExpress	E-ATMX-6-raw-cel-1308219081	-	-	-
10.5	99.2	GSM134341	St.Clair_1-2_331_Col-0_0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
10.4	99.2	GSM131164	AtGen_C-14_2-Pi-12_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
10.4	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467258	-	-	-
10.3	99.2	GSM38668	NSNP	GSE2268	Arabidopsis polysome microarray
10.2	99.2	GSM133087	JD AT+EO COL WT EXP2 03D INFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
10.2	99.2	GSM133088	JD AT+EO COL WT EXP2 03D UNINFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
10.1	99.2	GSM128681	Underwood_1-34_Mock-Inoculum-7h_Rep4_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.0	99.2	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
10.0	99.2	GSM131163	AtGen_C-13_1-Pi-12_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
9.9	99.1	GSM133080	JD AT+EO COL WT 12H UNINFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
9.7	99.1	GSM264763	Tween 0.1% 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
9.7	99.1	GSM142841	MG001_ATH1_A22-Torres-7N1	GSE6176	Impact of Type III effectors on plant defense responses
9.7	99.1	GSM133053	2794	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
9.6	99.1	GSM269820	WT leaf-well watered-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
9.5	99.1	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.5	99.1	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.5	99.1	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.4	99.1	GSM131155	AtGen_C-5_2-C-12_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
9.4	99.1	GSM269830	T6 leaf-well watered-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
9.4	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
9.4	99.1	GSM142809	SS002_ATH1_A1-smith-00h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
9.4	99.1	GSM131166	AtGen_C-16_1-Pi-24_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
9.3	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
9.3	99.1	GSM131123	AtGen_B-9_1-2-4_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.2	99.1	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.2	99.1	GSM133028	BC481-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
9.1	99.1	GSM128665	Underwood_1-17_Cor-hrpS-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.1	99.1	GSM142799	SS001_ATH1_A2-Smith-22	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
9.1	99.1	GSM134386	St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.0	99.1	GSM131167	AtGen_C-17_2-Pi-24_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
8.9	99.0	GSM133058	2506	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
8.8	99.0	GSM134439	St.Clair_1-64_270b_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
8.8	99.0	GSM269824	T8 leaf-well watered-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
8.7	99.0	GSM142817	SS002_ATH1_A9-smith-16h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
8.7	99.0	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
8.7	99.0	GSM134377	St.Clair_1-38_332_Est_0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
8.7	99.0	GSM128720	Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack

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