Specifically-expressed experiments

Gene ID At2g45220
Gene name pectinesterase family protein
Functional description F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFOM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
135.099.9ArrayExpressE-MEXP-1094-raw-cel-1379507313---
110.099.9GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
107.999.9GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
94.499.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
92.999.9GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
85.799.9GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
83.699.9GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
75.899.9ArrayExpressE-MEXP-1094-raw-cel-1379507273---
71.599.9ArrayExpressE-MEXP-546-raw-cel-863289424---
65.699.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
63.699.8GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
63.299.8ArrayExpressE-ATMX-25-raw-cel-1441077517---
60.699.8GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
60.699.8GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
60.399.8GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
59.999.8GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
59.799.8GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
57.199.8ArrayExpressE-ATMX-25-raw-cel-1441077482---
56.399.8GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
54.199.8ArrayExpressE-NASC-76-raw-cel-1359878976---
48.499.8ArrayExpressE-ATMX-25-raw-cel-1441077500---
46.799.8GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
46.199.8ArrayExpressE-ATMX-27-raw-cel-1441080508---
45.999.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
43.499.8GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
42.399.8GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
39.699.8ArrayExpressE-MEXP-711-raw-cel-1563002902---
39.599.8GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
38.199.8GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
36.699.7GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
36.099.7GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
35.499.7GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.399.7ArrayExpressE-MEXP-265-raw-cel-414618693---
34.599.7GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
32.999.7GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
29.599.7ArrayExpressE-MEXP-546-raw-cel-863289532---
29.099.7GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
28.299.7GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
28.199.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
27.999.7GSM128664Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.999.7ArrayExpressE-MEXP-807-raw-cel-1173273032---
26.399.7ArrayExpressE-MEXP-265-raw-cel-414618585---
24.799.6GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
23.299.6ArrayExpressE-NASC-76-raw-cel-1359879158---
22.799.6GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
22.499.6GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
20.899.6ArrayExpressE-NASC-76-raw-cel-1359878900---
20.599.6ArrayExpressE-ATMX-27-raw-cel-1441080540---
20.499.6ArrayExpressE-MEXP-265-raw-cel-414618796---
19.799.6GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
19.799.6ArrayExpressE-MEXP-546-raw-cel-863289476---
19.699.6GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
18.299.5GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.299.5GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
17.899.5GSM128673Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.699.5ArrayExpressE-MEXP-1094-raw-cel-1379507513---
17.599.5GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
16.799.5GSM133025BC181-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
16.199.5GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
15.799.5GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
15.799.5GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
15.099.4GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
14.699.4GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
14.599.4ArrayExpressE-MEXP-807-raw-cel-1173272921---
14.599.4GSM39192RRE1_C2GSE2169rre1 and rre2 mutantsLink to GEO
14.199.4GSM39208RRE2_C2GSE2169rre1 and rre2 mutantsLink to GEO
13.899.4ArrayExpressE-MEXP-285-raw-cel-440783152---
13.899.4ArrayExpressE-ATMX-27-raw-cel-1441080524---
13.799.4GSM133817Yang_1-2_old-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
13.799.4GSM250966mil4 with BTH treatment, biological rep3GSE9955MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense responseLink to GEO
13.599.4GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
13.499.4ArrayExpressE-MEXP-1094-raw-cel-1379507553---
13.399.4GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
13.299.4GSM131693ATGE_78_FGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
13.099.4ArrayExpressE-MEXP-1451-raw-cel-1585200298---
13.099.4GSM131691ATGE_78_DGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
13.099.4ArrayExpressE-MEXP-1451-raw-cel-1585200362---
13.099.4ArrayExpressE-MEXP-285-raw-cel-440783213---
12.899.3GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
12.899.3GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
12.299.3GSM131692ATGE_78_EGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
12.199.3GSM131689ATGE_77_EGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
12.099.3GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
12.099.3ArrayExpressE-MEXP-791-raw-cel-1122937605---
11.699.3GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.299.2ArrayExpressE-MEXP-791-raw-cel-1122937623---
10.899.2GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.899.2ArrayExpressE-MEXP-791-raw-cel-1122937587---
10.899.2GSM179972Arabidopsis roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.899.2GSM131302AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
10.799.2GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
10.799.2GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
10.799.2ArrayExpressE-MEXP-791-raw-cel-1122937596---
10.799.2GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
10.699.2GSM131690ATGE_77_FGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
10.699.2GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
10.399.2ArrayExpressE-TABM-62-raw-cel-720982524---
10.399.2GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.199.2GSM131688ATGE_77_DGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
9.999.1GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.999.1GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.899.1GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
9.799.1ArrayExpressE-MEXP-1451-raw-cel-1585200330---
9.799.1GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.799.1ArrayExpressE-ATMX-27-raw-cel-1441080684---
9.499.1GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.399.1GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
9.199.1GSM184931Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
9.099.1ArrayExpressE-MEXP-739-raw-cel-1099467267---
9.099.1GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.099.1GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
8.799.0ArrayExpressE-ATMX-1-raw-cel-1112746095---
8.699.0GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO



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