Specifically-expressed experiments

Gene ID At2g45190
Gene name AFO (ABNORMAL FLORAL ORGANS)
Functional description Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.499.8ArrayExpressE-MEXP-728-raw-cel-1062074361---
41.899.8ArrayExpressE-MEXP-728-raw-cel-1062074512---
38.699.8ArrayExpressE-MEXP-682-raw-cel-922397577---
37.999.8ArrayExpressE-MEXP-728-raw-cel-1062073338---
37.799.7ArrayExpressE-MEXP-682-raw-cel-922397560---
37.599.7GSM131675ATGE_49_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
37.299.7ArrayExpressE-MEXP-728-raw-cel-1062074684---
36.099.7GSM131674ATGE_49_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
36.099.7GSM131673ATGE_49_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
35.199.7ArrayExpressE-MEXP-728-raw-cel-1062074409---
34.099.7ArrayExpressE-MEXP-728-raw-cel-1062074264---
32.899.7GSM131671ATGE_48_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
31.999.7ArrayExpressE-MEXP-728-raw-cel-1062074758---
31.899.7GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
30.599.7GSM131677ATGE_50_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
30.499.7ArrayExpressE-MEXP-728-raw-cel-1062074005---
30.299.7GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
30.199.7ArrayExpressE-MEXP-728-raw-cel-1062074303---
29.199.7ArrayExpressE-MEXP-728-raw-cel-1062074653---
28.699.7GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
28.399.7ArrayExpressE-MEXP-728-raw-cel-1062074608---
27.999.7GSM131672ATGE_48_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
27.799.7GSM131678ATGE_50_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
27.399.7ArrayExpressE-MEXP-728-raw-cel-1062074577---
26.899.7GSM131676ATGE_50_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
25.499.6ArrayExpressE-MEXP-728-raw-cel-1062073825---
25.499.6ArrayExpressE-MEXP-728-raw-cel-1062073902---
25.399.6ArrayExpressE-MEXP-728-raw-cel-1062073942---
25.299.6GSM131661ATGE_29_A2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
25.299.6GSM318622Apex_mir-319b_17DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
25.199.6ArrayExpressE-MEXP-728-raw-cel-1062074089---
23.799.6GSM131682ATGE_52_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
23.699.6ArrayExpressE-MEXP-728-raw-cel-1062074471---
23.199.6GSM133920Weigel_2-12_CHIP-206-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
23.199.6ArrayExpressE-TABM-19-raw-cel-489757278---
22.999.6GSM131684ATGE_52_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
22.899.6ArrayExpressE-MEXP-728-raw-cel-1062074538---
22.799.6GSM133919Weigel_2-11_CHIP-206-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
22.799.6ArrayExpressE-TABM-19-raw-cel-489757257---
22.799.6GSM131663ATGE_29_C2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
22.799.6ArrayExpressE-MEXP-728-raw-cel-1062073253---
22.799.6GSM131654ATGE_8_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
22.599.6ArrayExpressE-MEXP-728-raw-cel-1062074718---
22.299.6ArrayExpressE-MEXP-728-raw-cel-1062074155---
22.099.6ArrayExpressE-MEXP-728-raw-cel-1062073688---
21.899.6ArrayExpressE-MEXP-728-raw-cel-1062073467---
21.699.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
21.399.6GSM131653ATGE_8_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
21.199.6GSM131669ATGE_47_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
20.999.6GSM318625Apex_octa_18DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
20.899.6GSM242963Steroid day 7 (day7D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
20.799.6GSM131667ATGE_47_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
20.799.6ArrayExpressE-TABM-19-raw-cel-489757488---
20.799.6GSM133930Weigel_2-22_CHIP-210-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
20.599.6ArrayExpressE-MEXP-728-raw-cel-1062074226---
20.099.6ArrayExpressE-MEXP-728-raw-cel-1062073752---
19.999.6GSM133918Weigel_2-10_CHIP-206-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
19.999.6ArrayExpressE-TABM-19-raw-cel-489757215---
19.899.6GSM131683ATGE_52_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
19.499.6ArrayExpressE-TABM-19-raw-cel-489757149---
19.499.6GSM133942Weigel_2-34_CHIP-214-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
19.199.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.099.5ArrayExpressE-TABM-19-raw-cel-489757463---
19.099.5GSM133929Weigel_2-21_CHIP-209-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
18.599.5GSM133944Weigel_2-36_CHIP-214_D_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
18.599.5ArrayExpressE-TABM-19-raw-cel-489757236---
18.599.5ArrayExpressE-MEXP-728-raw-cel-1062073620---
18.499.5GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
18.399.5ArrayExpressE-MEXP-728-raw-cel-1062073408---
18.399.5GSM131652ATGE_8_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
17.999.5GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.899.5GSM131665ATGE_46_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
17.899.5ArrayExpressE-TABM-19-raw-cel-489757107---
17.799.5GSM318623Apex_mir-319b_17DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
17.399.5ArrayExpressE-TABM-19-raw-cel-489757506---
17.399.5GSM133931Weigel_2-23_CHIP-210-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
17.399.5ArrayExpressE-TABM-19-raw-cel-489757414---
17.399.5GSM133927Weigel_2-19_CHIP-209-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
17.099.5ArrayExpressE-TABM-19-raw-cel-489757157---
17.099.5GSM133916Weigel_2-8_CHIP-205-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
16.999.5ArrayExpressE-TABM-19-raw-cel-489757174---
16.999.5GSM133943Weigel_2-35_CHIP-214-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
16.899.5GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.799.5ArrayExpressE-TABM-19-raw-cel-489757436---
16.799.5GSM133928Weigel_2-20_CHIP-209-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
16.499.5ArrayExpressE-TABM-19-raw-cel-489757526---
16.499.5GSM133932Weigel_2-24_CHIP-210-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
16.199.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
15.799.5ArrayExpressE-TABM-19-raw-cel-489757129---
15.799.5GSM133915Weigel_2-7_CHIP-205-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
15.599.5GSM242964Steroid day 7 (day7D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
15.399.4GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
15.299.4GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
15.299.4GSM131680ATGE_51_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
14.799.4ArrayExpressE-MEXP-728-raw-cel-1062073561---
14.599.4ArrayExpressE-TABM-19-raw-cel-489757023---
14.599.4GSM133939Weigel_2-31_CHIP-213-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
14.599.4GSM131666ATGE_46_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
14.599.4GSM131668ATGE_47_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
14.099.4GSM131679ATGE_51_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
14.099.4ArrayExpressE-TABM-19-raw-cel-489757194---
14.099.4ArrayExpressE-TABM-19-raw-cel-489757374---
14.099.4GSM133925Weigel_2-17_CHIP-208-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
13.999.4GSM131681ATGE_51_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
13.899.4ArrayExpressE-TABM-19-raw-cel-489757392---
13.899.4GSM133926Weigel_2-18_CHIP-208-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
13.799.4ArrayExpressE-MEXP-682-raw-cel-922397662---
13.799.4ArrayExpressE-TABM-19-raw-cel-489756936---
13.799.4GSM133937Weigel_2-29_CHIP-212-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
13.399.4GSM131664ATGE_46_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
13.099.4ArrayExpressE-TABM-63-raw-cel-681136797---
12.899.3ArrayExpressE-TABM-19-raw-cel-489757066---
12.899.3GSM133940Weigel_2-32_CHIP-213-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
12.699.3GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.699.3GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
12.599.3ArrayExpressE-TABM-63-raw-cel-681136835---
12.599.3GSM317519Apex_5DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
12.499.3GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
12.399.3GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.299.3ArrayExpressE-TABM-19-raw-cel-489756890---
12.299.3GSM133936Weigel_2-28_CHIP-212-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
12.199.3ArrayExpressE-TABM-19-raw-cel-489757344---
12.199.3GSM133924Weigel_2-16_CHIP-208-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
12.199.3ArrayExpressE-TABM-19-raw-cel-489757000---
12.199.3GSM133912Weigel_2-4_CHIP-204-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
11.999.3GSM311288Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
11.999.3ArrayExpressE-TABM-19-raw-cel-489757606---
11.999.3GSM133909Weigel_2-1_CHIP-203-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
11.899.3GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.799.3GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.499.3ArrayExpressE-TABM-19-raw-cel-489756915---
11.499.3GSM133910Weigel_2-2_CHIP-203-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
11.399.3ArrayExpressE-TABM-19-raw-cel-489757044---
11.399.3GSM133913Weigel_2-5_CHIP-204-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
11.299.2GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.599.2GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
10.499.2ArrayExpressE-TABM-19-raw-cel-489756980---
10.499.2GSM133938Weigel_2-30_CHIP-212-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
10.499.2ArrayExpressE-TABM-19-raw-cel-489757545---
10.499.2GSM133933Weigel_2-25_CHIP-211-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
10.299.2ArrayExpressE-TABM-19-raw-cel-489757085---
10.299.2GSM133914Weigel_2-6_CHIP-204-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
10.199.2ArrayExpressE-MEXP-682-raw-cel-922397679---
10.199.2ArrayExpressE-TABM-19-raw-cel-489756959---
10.199.2GSM133911Weigel_2-3_CHIP-203-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
9.899.1ArrayExpressE-TABM-19-raw-cel-489757590---
9.899.1GSM133935Weigel_2-27_CHIP-211-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
9.799.1GSM131618ATGE_54_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.699.1GSM311287Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
9.599.1ArrayExpressE-MEXP-682-raw-cel-922397713---
9.499.1GSM318618Apex_Col_14DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
9.499.1GSM131620ATGE_54_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.399.1GSM242962Mock day 7 (day7E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
9.399.1GSM318620Apex_mir-3TCP_14DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
9.299.1ArrayExpressE-TABM-19-raw-cel-489757569---
9.299.1GSM133934Weigel_2-26_CHIP-211-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
9.099.1GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.099.1ArrayExpressE-TABM-19-raw-cel-489757298---
9.099.1GSM133921Weigel_2-13_CHIP-207-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
9.099.1ArrayExpressE-MEXP-682-raw-cel-922397645---
8.999.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.999.0ArrayExpressE-MEXP-1592-raw-cel-1617526856---
8.999.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
8.899.0GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.799.0GSM242961Mock day 7 (day7E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
8.799.0ArrayExpressE-TABM-63-raw-cel-681136761---



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