Specifically-expressed experiments

Gene ID At2g43890
Gene name polygalacturonase, putative / pectinase, putative
Functional description F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
586.1100.0GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
278.3100.0GSM184921Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
154.799.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
141.899.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
140.499.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
137.699.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
134.399.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
126.399.9GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
124.599.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
119.799.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
119.199.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
112.799.9GSM218298At_NaCl_scm-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
110.799.9GSM218290At_NaCl_wermyb23-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
109.199.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
105.099.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
104.099.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
97.399.9GSM218297At_NaCl_scm-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
87.799.9GSM218285At_NaCl_Col-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
84.999.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
84.899.9GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
83.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
76.799.9GSM184841Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
74.999.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
74.499.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
70.199.9GSM218289At_NaCl_wermyb23-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
68.299.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
67.899.9GSM184842Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
66.399.8GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
65.699.8GSM218286At_NaCl_Col-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
65.099.8GSM184931Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
64.099.8GSM218294At_NaCl_cpctry-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
62.099.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
52.399.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
50.099.8GSM265421Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
49.499.8GSM265428Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
49.399.8GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
48.099.8GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
45.999.8GSM265420Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
45.299.8GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
44.099.8GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
42.399.8GSM189112HSP90_Reduced_RNAi-A3_Biological_Replicate_2_Technical_Replicate_1GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
35.999.7GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
34.199.7GSM218293At_NaCl_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
33.399.7GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
31.599.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
30.199.7GSM133979Birnbaum_1-9_StageII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
25.699.7GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
24.999.6GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
23.499.6GSM184844Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
20.899.6GSM218292At_Standard_cpctry-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
20.699.6GSM133978Birnbaum_1-8_StageII-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
20.499.6GSM218288At_Standard_wermyb23-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
19.199.6GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
18.299.5GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
17.499.5GSM184843Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
16.999.5GSM218295At_Standard_scm-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
16.799.5GSM184632Arabidopsis, whole roots, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
16.499.5GSM218296At_Standard_scm-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
15.699.5GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
15.099.4GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
14.699.4GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
14.399.4GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
13.499.4GSM266671Arabidopsis, root cells, cortex, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
12.999.3GSM265429Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
12.799.3GSM218283At_Standard_Col-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
12.399.3GSM218287At_Standard_wermyb23-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
11.799.3GSM179971Arabidopsis roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.799.3GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.999.2GSM184889Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.299.2GSM184932Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
10.299.2GSM218291At_Standard_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
9.799.1GSM218284At_Standard_Col-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
9.499.1GSM133981Birnbaum_1-11_StageII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
8.999.0GSM184915Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO



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