Specifically-expressed experiments

Gene ID	At2g42830
Gene name	SHP2 (SHATTERPROOF 2)
Functional description	AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
476.7	100.0	GSM284395	Arabidopsis GPSc1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
371.2	100.0	GSM311294	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
366.9	100.0	GSM284398	Arabidopsis GGSc2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
348.8	100.0	GSM284396	Arabidopsis GPSc2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
327.5	100.0	GSM311281	Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
309.9	100.0	GSM311282	Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
262.7	100.0	GSM284397	Arabidopsis GGSc1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
181.7	100.0	GSM311295	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
171.8	100.0	GSM311293	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
139.5	99.9	GSM311296	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
138.0	99.9	GSM311284	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
128.6	99.9	GSM311285	Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
118.0	99.9	GSM311283	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
102.9	99.9	GSM147963	WT Globular Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
89.7	99.9	GSM147966	lec1-1 Globular Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
84.3	99.9	GSM311286	Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
73.4	99.9	GSM147964	WT Globular Stage Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
73.3	99.9	GSM10445	WT 24-Hr Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
72.5	99.9	GSM147965	lec1-1 Globular Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
71.0	99.9	GSM10446	WT 24-Hr Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
65.8	99.8	GSM10477	lec1-1 24-Hr Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
64.6	99.8	GSM10479	lec1-1 Cotyledon Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
54.4	99.8	GSM10480	lec1-1 Cotyledon Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
52.9	99.8	GSM10449	WT Cotyledon Stage Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
50.0	99.8	GSM10448	WT Cotyledon Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
42.9	99.8	GSM10478	lec1-1 24-Hr Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
42.8	99.8	GSM10442	WT Ovule 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
42.4	99.8	ArrayExpress	E-MEXP-285-raw-cel-440783213	-	-	-
41.1	99.8	ArrayExpress	E-MEXP-285-raw-cel-440783152	-	-	-
33.0	99.7	GSM10441	WT Ovule 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
23.6	99.6	GSM131689	ATGE_77_E	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
22.9	99.6	GSM131688	ATGE_77_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
20.9	99.6	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.1	99.6	GSM131690	ATGE_77_F	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
17.6	99.5	GSM133820	Yang_1-5_young-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
17.2	99.5	ArrayExpress	E-MEXP-1451-raw-cel-1585200330	-	-	-
15.9	99.5	ArrayExpress	E-MEXP-1451-raw-cel-1585200298	-	-	-
15.5	99.5	ArrayExpress	E-MEXP-1451-raw-cel-1585200170	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-1451-raw-cel-1585200362	-	-	-
12.3	99.3	GSM133816	Yang_1-1_young-pod_Rep1_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
12.0	99.3	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
11.3	99.3	ArrayExpress	E-MEXP-1246-raw-cel-1504120171	-	-	-
11.2	99.2	ArrayExpress	E-MEXP-1451-raw-cel-1585200202	-	-	-
11.1	99.2	GSM131693	ATGE_78_F	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
11.1	99.2	ArrayExpress	E-MEXP-1451-raw-cel-1585200234	-	-	-
11.0	99.2	GSM131594	ATGE_37_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.6	99.2	ArrayExpress	E-MEXP-1246-raw-cel-1504120291	-	-	-
10.5	99.2	ArrayExpress	E-MEXP-1246-raw-cel-1504120231	-	-	-
10.5	99.2	GSM67078	Arabidopsis_Ovary01	GSE3056	Arabidopsis Pollination Study
10.0	99.2	GSM131692	ATGE_78_E	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
9.6	99.1	GSM131596	ATGE_37_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.6	99.1	GSM131595	ATGE_37_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.5	99.1	GSM131691	ATGE_78_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
9.4	99.1	GSM131686	ATGE_76_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
9.3	99.1	GSM67080	Arabidopsis_Ovary03	GSE3056	Arabidopsis Pollination Study
9.1	99.1	GSM133818	Yang_1-3_young-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
9.1	99.1	GSM131685	ATGE_76_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
9.0	99.1	ArrayExpress	E-MEXP-1246-raw-cel-1504120201	-	-	-
8.8	99.0	GSM131687	ATGE_76_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
8.8	99.0	GSM67081	Arabidopsis_Ovary04	GSE3056	Arabidopsis Pollination Study

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