Specifically-expressed experiments

Gene ID At2g40160
Gene name -
Functional description F:unknown;P:biological_process unknown;C:endomembrane system;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
291.5100.0GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
242.8100.0GSM266673Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
220.2100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
162.799.9GSM266674Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
158.599.9GSM266672Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
139.399.9GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
106.999.9GSM184898Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
100.799.9GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
100.399.9GSM184899Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
60.599.8ArrayExpressE-MEXP-828-raw-cel-1156922634---
59.199.8GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
58.099.8GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
57.799.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
51.399.8GSM133973Birnbaum_1-3_src5-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
51.099.8GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
46.799.8GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
44.599.8GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
42.999.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
42.699.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
42.199.8GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
42.099.8GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
41.299.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
35.199.7GSM133971Birnbaum_1-1_src5-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
35.099.7GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
33.699.7GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
33.499.7GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
33.199.7GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
33.099.7GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.999.7GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
31.799.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
30.799.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
29.799.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
29.099.7GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
28.999.7GSM226539L9SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
26.799.7GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
26.799.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.599.7ArrayExpressE-MEXP-828-raw-cel-1156922968---
26.399.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
25.799.7GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
24.899.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.899.6ArrayExpressE-MEXP-828-raw-cel-1156922659---
24.599.6GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
23.499.6GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
23.399.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.999.6GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
22.899.6GSM133993Birnbaum_1-26_J0571-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
22.299.6GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
21.899.6GSM133984Birnbaum_1-14_StageIII-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
21.599.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
20.599.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.999.6GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
19.399.6GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
18.099.5GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
17.599.5ArrayExpressE-MEXP-828-raw-cel-1156922485---
16.199.5GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
15.999.5GSM260882Yap_A1-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
15.699.5GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.899.4ArrayExpressE-MEXP-828-raw-cel-1156922438---
14.399.4GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
14.399.4GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
14.299.4GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
14.199.4ArrayExpressE-MEXP-828-raw-cel-1156922416---
13.499.4GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
13.499.4GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
13.299.4GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
13.099.4GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
12.999.3ArrayExpressE-MEXP-828-raw-cel-1156922467---
12.999.3GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
12.999.3ArrayExpressE-MEXP-828-raw-cel-1156922509---
12.299.3GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
12.199.3GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
11.999.3ArrayExpressE-MEXP-828-raw-cel-1156922794---
11.799.3ArrayExpressE-MEXP-791-raw-cel-1122937614---
11.699.3ArrayExpressE-MEXP-828-raw-cel-1156922846---
11.599.3GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
11.399.3ArrayExpressE-MEXP-828-raw-cel-1156922386---
11.099.2GSM260881Yap_A2-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
10.899.2GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.699.2GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
10.699.2GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.599.2ArrayExpressE-MEXP-828-raw-cel-1156922987---
10.399.2GSM184903Arabidopsis, root cells, stele, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.099.2GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
10.099.2ArrayExpressE-MEXP-828-raw-cel-1156922533---
9.999.1ArrayExpressE-MEXP-828-raw-cel-1156922684---
9.899.1GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.899.1ArrayExpressE-MEXP-828-raw-cel-1156922553---
9.699.1ArrayExpressE-MEXP-828-raw-cel-1156922891---
9.599.1GSM266675Arabidopsis, root cells, stele, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
9.499.1GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
9.399.1ArrayExpressE-MEXP-635-raw-cel-912819824---
9.099.1GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
8.899.0GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
8.699.0GSM133121S0_12H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO



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