Specifically-expressed experiments

Gene ID At2g39660
Gene name BIK1 (BOTRYTIS-INDUCED KINASE1)
Functional description Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
119.799.9ArrayExpressE-MEXP-1443-raw-cel-1581869863---
85.899.9ArrayExpressE-MEXP-1443-raw-cel-1581869921---
56.599.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
54.599.8GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
47.799.8GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
45.899.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
41.899.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
36.099.7GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
34.699.7GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
34.299.7GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
33.899.7ArrayExpressE-NASC-76-raw-cel-1359878951---
30.199.7ArrayExpressE-MEXP-546-raw-cel-863289532---
29.899.7GSM131148AtGen_B-34_3-6-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
29.499.7GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
28.499.7ArrayExpressE-MEXP-1094-raw-cel-1379507313---
28.399.7ArrayExpressE-MEXP-1443-raw-cel-1581869745---
27.499.7ArrayExpressE-MEXP-807-raw-cel-1173272948---
27.099.7GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
26.599.7ArrayExpressE-NASC-76-raw-cel-1359879106---
24.399.6ArrayExpressE-MEXP-546-raw-cel-863289506---
23.899.6ArrayExpressE-MEXP-546-raw-cel-863289404---
23.299.6ArrayExpressE-MEXP-1443-raw-cel-1581869803---
22.499.6ArrayExpressE-MEXP-546-raw-cel-863289450---
22.399.6GSM131146AtGen_B-32_3-4-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
21.599.6GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.799.6GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.299.6GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
19.999.6ArrayExpressE-MEXP-1797-raw-cel-1669767967---
19.999.6ArrayExpressE-NASC-76-raw-cel-1359879132---
19.699.6ArrayExpressE-MEXP-1797-raw-cel-1669768084---
18.899.5GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
18.599.5GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.499.5GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
18.399.5ArrayExpressE-MEXP-546-raw-cel-863289424---
17.599.5ArrayExpressE-MEXP-546-raw-cel-863289476---
17.099.5GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
16.999.5GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
16.399.5ArrayExpressE-MEXP-1094-raw-cel-1379507273---
16.299.5GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
15.399.4ArrayExpressE-MEXP-1797-raw-cel-1669768030---
14.899.4GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
14.699.4GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.599.4GSM131119AtGen_B-5_1-5-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
14.599.4GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
14.499.4ArrayExpressE-MEXP-1797-raw-cel-1669768039---
14.399.4ArrayExpressE-MEXP-1797-raw-cel-1669767940---
14.099.4GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.999.4GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.899.4ArrayExpressE-ATMX-28-raw-cel-1441104826---
13.699.4ArrayExpressE-MEXP-1094-raw-cel-1379507553---
13.699.4GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
13.599.4ArrayExpressE-ATMX-28-raw-cel-1441104835---
13.599.4GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
13.599.4GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.299.4GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.099.4ArrayExpressE-MEXP-547-raw-cel-863346457---
13.099.4ArrayExpressE-MEXP-1094-raw-cel-1379507513---
12.899.3GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
12.699.3GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
12.599.3ArrayExpressE-MEXP-547-raw-cel-863346430---
12.399.3GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
12.399.3GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.399.3ArrayExpressE-NASC-76-raw-cel-1359879028---
12.099.3GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.999.3GSM131118AtGen_B-4_1-4-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.399.3ArrayExpressE-NASC-76-raw-cel-1359879184---
10.999.2ArrayExpressE-MEXP-1797-raw-cel-1669767949---
10.899.2GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.399.2GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.199.2GSM272988flu, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
10.199.2GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.199.2ArrayExpressE-NASC-76-raw-cel-1359878976---
10.199.2ArrayExpressE-MEXP-547-raw-cel-863346376---
10.199.2ArrayExpressE-MEXP-711-raw-cel-1563002902---
10.099.2GSM131133AtGen_B-19_2-5-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.999.1ArrayExpressE-NASC-76-raw-cel-1359879158---
9.799.1ArrayExpressE-MEXP-547-raw-cel-863346403---
9.699.1GSM272991flu over-tAPX 14-2, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
9.699.1GSM133814Diamond_A-3-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
9.599.1GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.599.1GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.499.1ArrayExpressE-NASC-76-raw-cel-1359878900---
9.399.1GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.399.1GSM133815Diamond_A-4-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
8.999.0GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.899.0GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.699.0GSM48122Col_8mer1GSE2538Chitin Oligomer ExperimentLink to GEO



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