Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
173.3 | 100.0 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root |  |
79.4 | 99.9 | GSM184537 | Whole roots 2hr KCl control treated then frozen, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root |  |
72.1 | 99.9 | GSM133762 | Lindsey_1-14_torpedo-root_Rep1_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues |  |
48.1 | 99.8 | GSM131697 | ATGE_81_A | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
47.0 | 99.8 | GSM131699 | ATGE_81_C | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
44.3 | 99.8 | ArrayExpress | E-ATMX-1-raw-cel-1112746209 | - | - | - |
42.1 | 99.8 | GSM131326 | AtGen_6-3522_Saltstress-Roots-12.0h_Rep2 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
38.8 | 99.8 | GSM131698 | ATGE_81_B | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
35.7 | 99.7 | GSM13784 | Cycloheximide - replicate | GSE911 | Identification of LEAFY targets during reproductive transition |  |
32.1 | 99.7 | GSM184497 | Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root |  |
31.9 | 99.7 | ArrayExpress | E-ATMX-1-raw-cel-1112746154 | - | - | - |
29.9 | 99.7 | GSM131329 | AtGen_6-3621_Saltstress-Roots-24.0h_Rep1 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
29.4 | 99.7 | GSM176878 | AWP_AL_Txed_2 | GSE7334 | Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress |  |
25.7 | 99.7 | ArrayExpress | E-ATMX-1-raw-cel-1112746267 | - | - | - |
23.7 | 99.6 | GSM184931 | Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |
23.7 | 99.6 | GSM75521 | slr-1 6h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
23.4 | 99.6 | GSM184933 | Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |
22.7 | 99.6 | GSM131301 | AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
22.6 | 99.6 | ArrayExpress | E-MEXP-828-raw-cel-1156922987 | - | - | - |
22.5 | 99.6 | ArrayExpress | E-MEXP-828-raw-cel-1156922923 | - | - | - |
22.4 | 99.6 | GSM133122 | S0_12H_B | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
21.1 | 99.6 | GSM131302 | AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
21.1 | 99.6 | ArrayExpress | E-MEXP-828-raw-cel-1156922438 | - | - | - |
20.6 | 99.6 | GSM131330 | AtGen_6-3622_Saltstress-Roots-24.0h_Rep2 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
19.1 | 99.6 | GSM131378 | AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
18.7 | 99.5 | ArrayExpress | E-MEXP-828-raw-cel-1156922809 | - | - | - |
18.6 | 99.5 | ArrayExpress | E-MEXP-828-raw-cel-1156922296 | - | - | - |
18.5 | 99.5 | GSM131281 | AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1 | GSE5621 | AtGenExpress: Stress Treatments (Cold stress) |  |
18.4 | 99.5 | ArrayExpress | E-MEXP-791-raw-cel-1122937614 | - | - | - |
18.0 | 99.5 | ArrayExpress | E-MEXP-828-raw-cel-1156922485 | - | - | - |
17.8 | 99.5 | ArrayExpress | E-MEXP-828-raw-cel-1156922905 | - | - | - |
17.7 | 99.5 | GSM13780 | Cycloheximide | GSE911 | Identification of LEAFY targets during reproductive transition |  |
17.0 | 99.5 | GSM131277 | AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1 | GSE5621 | AtGenExpress: Stress Treatments (Cold stress) |  |
17.0 | 99.5 | ArrayExpress | E-ATMX-1-raw-cel-1112746095 | - | - | - |
16.9 | 99.5 | GSM131306 | AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
16.5 | 99.5 | GSM13779 | Dexamethasone plus cycloheximide | GSE911 | Identification of LEAFY targets during reproductive transition |  |
16.1 | 99.5 | GSM131322 | AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
15.6 | 99.5 | GSM131297 | AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
15.4 | 99.5 | GSM131377 | AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
15.4 | 99.5 | GSM265411 | Arabidopsis, whole roots, -Fe, replicate 1 | GSE10496 | Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) |  |
15.4 | 99.5 | GSM176879 | AWP_Control_1 | GSE7334 | Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress |  |
15.2 | 99.4 | GSM133133 | S1500_12H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
15.2 | 99.4 | ArrayExpress | E-MEXP-828-raw-cel-1156922968 | - | - | - |
15.1 | 99.4 | GSM131317 | AtGen_6-3321_Saltstress-Roots-3.0h_Rep1 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
15.1 | 99.4 | GSM157324 | Hammond_3-17_Potassium-starved-root_Rep3_ATH1 | GSE6825 | Differential gene expression patterns in potassium-starved and Caesium-treated plants |  |
14.9 | 99.4 | GSM131106 | Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1 | GSE5614 | Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study) |  |
14.8 | 99.4 | GSM131702 | ATGE_82_C | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
14.7 | 99.4 | GSM131108 | Broadley_1-6_A6-Bo+P3-nutrient-replete_Rep3_ATH1 | GSE5614 | Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study) |  |
14.7 | 99.4 | GSM133141 | S1500_8H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
14.7 | 99.4 | ArrayExpress | E-MEXP-828-raw-cel-1156922944 | - | - | - |
14.7 | 99.4 | GSM131373 | AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
14.3 | 99.4 | GSM142673 | SF001_ATH1_A3-Fille-ANGR4-12 | GSE6155 | Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots. |  |
14.1 | 99.4 | GSM131293 | AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
14.1 | 99.4 | GSM131298 | AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
14.0 | 99.4 | GSM265472 | Arabidopsis, whole roots, -Fe, 48 hour, rep 2 | GSE10502 | Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots |  |
13.9 | 99.4 | ArrayExpress | E-MEXP-828-raw-cel-1156922829 | - | - | - |
13.8 | 99.4 | ArrayExpress | E-MEXP-828-raw-cel-1156922872 | - | - | - |
13.7 | 99.4 | GSM226538 | L8SB | GSE8934 | A high resolution organ expression map reveals novel expression patterns and predicts cellular function |  |
13.5 | 99.4 | GSM205435 | Col_ leaf_ wildtype_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation |  |
13.3 | 99.4 | GSM133121 | S0_12H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
13.1 | 99.4 | GSM75517 | slr-1 2h NAA replicate 1 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
13.1 | 99.4 | GSM157307 | Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1 | GSE6824 | Identification of genes involved in nutritional regulation of root architecture |  |
13.1 | 99.4 | GSM133129 | S0_8H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
12.7 | 99.3 | GSM75518 | slr-1 6h NAA replicate 1 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
12.4 | 99.3 | GSM131381 | AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
12.4 | 99.3 | GSM143301 | Ts_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 |  |
12.3 | 99.3 | GSM131282 | AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2 | GSE5621 | AtGenExpress: Stress Treatments (Cold stress) |  |
12.3 | 99.3 | GSM131325 | AtGen_6-3521_Saltstress-Roots-12.0h_Rep1 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
12.2 | 99.3 | GSM142671 | SF001_ATH1_A1-Fille-WT-nodex | GSE6155 | Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots. |  |
12.2 | 99.3 | GSM131273 | AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1 | GSE5621 | AtGenExpress: Stress Treatments (Cold stress) |  |
12.2 | 99.3 | GSM131567 | ATGE_95_A | GSE5631 | AtGenExpress: Developmental series (roots) |  |
12.1 | 99.3 | GSM157327 | Hammond_3-11_Potassium-starved-root_Rep2_ATH1 | GSE6825 | Differential gene expression patterns in potassium-starved and Caesium-treated plants |  |
12.1 | 99.3 | GSM131564 | ATGE_94_A | GSE5631 | AtGenExpress: Developmental series (roots) |  |
12.0 | 99.3 | GSM133135 | S1500_24H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
12.0 | 99.3 | GSM260883 | Yap_A2-AMF_Rep2 | GSE10323 | Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways |  |
11.9 | 99.3 | ArrayExpress | E-MEXP-828-raw-cel-1156922368 | - | - | - |
11.8 | 99.3 | GSM184846 | Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2 | GSE7639 | Expression analysis of root developmental zones after treatment with salt |  |
11.8 | 99.3 | GSM265413 | Arabidopsis, whole roots, -Fe, replicate 3 | GSE10496 | Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) |  |
11.7 | 99.3 | GSM291114 | root - 21% oxygen - 30min - G | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants |  |
11.2 | 99.2 | GSM226530 | LCOLUMELLASB | GSE8934 | A high resolution organ expression map reveals novel expression patterns and predicts cellular function |  |
11.2 | 99.2 | GSM131278 | AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2 | GSE5621 | AtGenExpress: Stress Treatments (Cold stress) |  |
11.0 | 99.2 | ArrayExpress | E-MEXP-828-raw-cel-1156922416 | - | - | - |
10.9 | 99.2 | GSM131305 | AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) |  |
10.9 | 99.2 | GSM157325 | Hammond_3-18_Caesium-treated-root_Rep3_ATH1 | GSE6825 | Differential gene expression patterns in potassium-starved and Caesium-treated plants |  |
10.9 | 99.2 | GSM143310 | Tsu_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 |  |
10.8 | 99.2 | GSM131318 | AtGen_6-3322_Saltstress-Roots-3.0h_Rep2 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
10.8 | 99.2 | GSM133124 | S0_24H_B | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
10.7 | 99.2 | GSM131705 | ATGE_83_C | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
10.7 | 99.2 | GSM131570 | ATGE_98_A | GSE5631 | AtGenExpress: Developmental series (roots) |  |
10.7 | 99.2 | GSM265412 | Arabidopsis, whole roots, -Fe, replicate 2 | GSE10496 | Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) |  |
10.7 | 99.2 | GSM260882 | Yap_A1-AMF_Rep2 | GSE10323 | Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways |  |
10.7 | 99.2 | GSM131369 | AtGen_6-5321_Genotoxicstress-Roots-3.0h_Rep1 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
10.7 | 99.2 | GSM75512 | Col-0 0h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
10.6 | 99.2 | GSM260881 | Yap_A2-AMF | GSE10323 | Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways |  |
10.6 | 99.2 | ArrayExpress | E-MEXP-828-raw-cel-1156922684 | - | - | - |
10.5 | 99.2 | GSM131569 | ATGE_95_C | GSE5631 | AtGenExpress: Developmental series (roots) |  |
10.5 | 99.2 | GSM143308 | Tsu_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 |  |
10.5 | 99.2 | GSM253645 | High_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 |  |
10.4 | 99.2 | GSM131105 | Broadley_1-3_A3-Bo-P2-phosphate-starved_Rep2_ATH1 | GSE5614 | Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study) |  |
10.4 | 99.2 | GSM142672 | SF001_ATH1_A2-Fille-WT-+dex | GSE6155 | Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots. |  |
10.2 | 99.2 | GSM133123 | S0_24H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
10.2 | 99.2 | ArrayExpress | E-MEXP-828-raw-cel-1156922634 | - | - | - |
10.2 | 99.2 | GSM131321 | AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 | GSE5623 | AtGenExpress: Stress Treatments (Salt stress) |  |
10.1 | 99.2 | GSM131345 | AtGen_6-4321_Droughtstress-Roots-3.0h_Rep1 | GSE5624 | AtGenExpress: Stress Treatments (Drought stress) |  |
10.0 | 99.2 | GSM265471 | Arabidopsis, whole roots, -Fe, 48 hour, rep 1 | GSE10502 | Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots |  |
10.0 | 99.2 | GSM133136 | S1500_24H_B | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
9.8 | 99.1 | GSM291101 | root - 21% oxygen - 2h - E | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants |  |
9.8 | 99.1 | GSM265473 | Arabidopsis, whole roots, -Fe, 72 hour, rep 1 | GSE10502 | Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots |  |
9.8 | 99.1 | GSM131370 | AtGen_6-5322_Genotoxicstress-Roots-3.0h_Rep2 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
9.7 | 99.1 | GSM131707 | ATGE_84_B | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
9.7 | 99.1 | GSM131430 | AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2 | GSE5627 | AtGenExpress: Stress Treatments (Wounding stress) |  |
9.7 | 99.1 | GSM133139 | S1500_4H_A | GSE5688 | AtGenExpress: Response to sulfate limitation |  |
9.7 | 99.1 | GSM157330 | Coates_1-2_ara1OX_Rep1_ATH1 | GSE6826 | Identification of candidate Arabidillo target genes in Arabidopsis |  |
9.6 | 99.1 | GSM131382 | AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
9.6 | 99.1 | GSM131461 | AtGen_6-9421_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep1 | GSE5628 | AtGenExpress: Stress Treatments (Heat stress) |  |
9.5 | 99.1 | GSM142731 | CH001_ATH1_A010-Hampt-akc | GSE6161 | Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4. |  |
9.5 | 99.1 | ArrayExpress | E-MEXP-828-raw-cel-1156922509 | - | - | - |
9.5 | 99.1 | GSM143302 | Ts_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 |  |
9.5 | 99.1 | GSM131366 | AtGen_6-5222_Genotoxicstress-Roots-1.0h_Rep2 | GSE5625 | AtGenExpress: Stress Treatments (Genotoxic stress) |  |
9.4 | 99.1 | ArrayExpress | E-MEXP-828-raw-cel-1156922891 | - | - | - |
9.4 | 99.1 | GSM265474 | Arabidopsis, whole roots, -Fe, 72 hour, rep 2 | GSE10502 | Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots |  |
9.4 | 99.1 | ArrayExpress | E-MEXP-791-raw-cel-1122937587 | - | - | - |
9.4 | 99.1 | ArrayExpress | E-MEXP-722-raw-cel-1062243048 | - | - | - |
9.4 | 99.1 | GSM142674 | SF002_ATH1_A5-Fille-WTnodex | GSE6155 | Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots. |  |
9.3 | 99.1 | ArrayExpress | E-MEXP-791-raw-cel-1122937578 | - | - | - |
9.1 | 99.1 | GSM131706 | ATGE_84_A | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |
9.1 | 99.1 | GSM157305 | Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1 | GSE6824 | Identification of genes involved in nutritional regulation of root architecture |  |
8.8 | 99.0 | GSM106833 | opr3_JA_0.5 hr_Rep1 | GSE4733 | Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling |  |
8.8 | 99.0 | GSM131572 | ATGE_98_C | GSE5631 | AtGenExpress: Developmental series (roots) |  |
8.7 | 99.0 | GSM131574 | ATGE_99_B | GSE5631 | AtGenExpress: Developmental series (roots) |  |
8.6 | 99.0 | GSM291113 | root - 21% oxygen - 30min - F | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants |  |
8.6 | 99.0 | GSM131704 | ATGE_83_B | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) |  |