Specifically-expressed experiments

Gene ID	At2g37040
Gene name	pal1 (Phe ammonia lyase 1)
Functional description	encodes a protein similar to phenylalanine ammonia-lyase

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
53.3	99.8	GSM184494	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
53.2	99.8	GSM184500	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
43.4	99.8	GSM184495	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.4	99.7	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
34.8	99.7	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
31.8	99.7	GSM184504	Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
31.1	99.7	GSM184498	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
30.9	99.7	GSM184486	Epidermis&Cortex root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.8	99.7	GSM184502	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.5	99.7	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
26.5	99.7	GSM184900	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
26.3	99.7	GSM184499	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
24.6	99.6	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
24.1	99.6	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
23.8	99.6	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
21.3	99.6	ArrayExpress	E-MEXP-265-raw-cel-414618291	-	-	-
20.6	99.6	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
20.3	99.6	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.2	99.6	GSM184501	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.0	99.6	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.0	99.6	GSM184487	Epidermis&Cortex root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.7	99.6	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
19.0	99.5	ArrayExpress	E-MEXP-265-raw-cel-414617695	-	-	-
18.7	99.5	GSM133754	Turner_A-8-Turne-WT-Base2_SLD	GSE5729	Role of COV in vascular patterning
18.5	99.5	ArrayExpress	E-NASC-76-raw-cel-1359878976	-	-	-
18.3	99.5	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.5	99.5	ArrayExpress	E-NASC-76-raw-cel-1359878900	-	-	-
16.8	99.5	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.7	99.5	GSM133753	Turner_A-7-Turne-WT-Base1_SLD	GSE5729	Role of COV in vascular patterning
16.6	99.5	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
16.2	99.5	ArrayExpress	E-MEXP-265-raw-cel-414617890	-	-	-
15.9	99.5	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
14.8	99.4	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
14.8	99.4	ArrayExpress	E-MEXP-265-raw-cel-414617783	-	-	-
14.7	99.4	GSM131655	ATGE_27_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
14.5	99.4	ArrayExpress	E-MEXP-265-raw-cel-414618585	-	-	-
14.4	99.4	GSM184507	Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.3	99.4	ArrayExpress	E-NASC-76-raw-cel-1359879158	-	-	-
14.0	99.4	ArrayExpress	E-MEXP-265-raw-cel-414618491	-	-	-
14.0	99.4	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
13.5	99.4	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.2	99.4	GSM184508	Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.1	99.4	GSM265473	Arabidopsis, whole roots, -Fe, 72 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
13.0	99.4	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
13.0	99.4	GSM184503	Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.9	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922634	-	-	-
12.8	99.3	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
12.7	99.3	GSM184916	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
12.6	99.3	ArrayExpress	E-MEXP-265-raw-cel-414618394	-	-	-
12.6	99.3	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
12.5	99.3	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
12.4	99.3	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
12.3	99.3	GSM184506	Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.3	99.3	GSM184489	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.2	99.3	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.0	99.3	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.0	99.3	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
11.9	99.3	GSM265474	Arabidopsis, whole roots, -Fe, 72 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
11.6	99.3	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.4	99.3	ArrayExpress	E-MEXP-265-raw-cel-414618796	-	-	-
11.3	99.3	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
11.2	99.2	GSM265472	Arabidopsis, whole roots, -Fe, 48 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
11.1	99.2	GSM184898	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
11.1	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922659	-	-	-
11.0	99.2	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.8	99.2	GSM131657	ATGE_27_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.8	99.2	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
10.6	99.2	GSM266673	Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.6	99.2	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.6	99.2	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.5	99.2	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.5	99.2	GSM131148	AtGen_B-34_3-6-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.4	99.2	GSM226550	Slice8JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.4	99.2	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.3	99.2	GSM133812	Diamond_A-1-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
10.3	99.2	GSM133816	Yang_1-1_young-pod_Rep1_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
10.2	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289476	-	-	-
10.2	99.2	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
10.2	99.2	GSM218587	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.2	99.2	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.1	99.2	GSM131326	AtGen_6-3522_Saltstress-Roots-12.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
10.0	99.2	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.0	99.2	GSM142637	MC002_ATH1_A5.3-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.0	99.2	GSM184492	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.0	99.2	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.9	99.1	GSM184485	Epidermis&Cortex root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.9	99.1	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.9	99.1	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
9.8	99.1	GSM131341	AtGen_6-4221_Droughtstress-Roots-1.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.7	99.1	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.7	99.1	GSM131282	AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.7	99.1	GSM133813	Diamond_A-2-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
9.7	99.1	GSM266674	Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.6	99.1	GSM184523	Stele root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.5	99.1	GSM265470	Arabidopsis, whole roots, -Fe, 24 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.5	99.1	ArrayExpress	E-MEXP-1112-raw-cel-1590666053	-	-	-
9.4	99.1	GSM131281	AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.4	99.1	ArrayExpress	E-MEXP-449-raw-cel-676423253	-	-	-
9.4	99.1	GSM184930	Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
9.2	99.1	GSM142635	MC002_ATH1_A5.1-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.1	99.1	ArrayExpress	E-MEXP-1112-raw-cel-1590666001	-	-	-
9.1	99.1	GSM184509	Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.1	99.1	GSM142670	SF002_ATH1_A8-Fille-ANGR4-12+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
9.1	99.1	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
9.1	99.1	GSM265471	Arabidopsis, whole roots, -Fe, 48 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.0	99.1	ArrayExpress	E-MEXP-1112-raw-cel-1590665637	-	-	-
8.9	99.0	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
8.9	99.0	GSM142669	SF002_ATH1_A7-Fille-ANGR4-12nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
8.9	99.0	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
8.8	99.0	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.8	99.0	GSM142674	SF002_ATH1_A5-Fille-WTnodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
8.8	99.0	ArrayExpress	E-ATMX-5-raw-cel-1303134304	-	-	-
8.7	99.0	GSM133815	Diamond_A-4-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
8.7	99.0	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
8.7	99.0	GSM184490	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.6	99.0	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
8.6	99.0	GSM226549	Slice7JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function

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