Specifically-expressed experiments

Gene ID At2g32290
Gene name BAM6 (BETA-AMYLASE 6)
Functional description F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:chloroplast;PBO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
133.399.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
94.499.9GSM269822T6 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
76.199.9ArrayExpressE-ATMX-32-raw-cel-1562974621---
75.899.9ArrayExpressE-ATMX-32-raw-cel-1562974681---
71.499.9GSM269815T6 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
67.599.8ArrayExpressE-ATMX-32-raw-cel-1562974595---
58.399.8GSM260879A2-Greco-WTGSE10322Higher order transcriptional regulation conferred by the bountiful gain of function mutantLink to GEO
58.199.8ArrayExpressE-ATMX-32-raw-cel-1562974409---
57.499.8ArrayExpressE-ATMX-32-raw-cel-1562974527---
56.599.8GSM269833T8 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
47.999.8GSM142819SS002_ATH1_A11-smith-24h_repeatGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
44.199.8GSM269824T8 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
41.799.8GSM131156AtGen_C-6_3-C-12_REP3_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
39.699.8GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
37.099.7ArrayExpressE-ATMX-32-raw-cel-1562974504---
36.799.7ArrayExpressE-ATMX-32-raw-cel-1562974484---
35.299.7GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
34.699.7GSM269832T8 leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
34.299.7GSM131155AtGen_C-5_2-C-12_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
34.299.7GSM269828WT leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
33.899.7GSM131154AtGen_C-4_1-C-12_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
32.899.7GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
31.599.7GSM269816T8 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
31.499.7GSM131463AtGen_6-9511_Heatstress(3h)+9hrecovery-Shoots-12.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
28.899.7GSM269818C2 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
28.499.7ArrayExpressE-MEXP-1454-raw-cel-1585858145---
27.399.7GSM142893MW001_ATH1_A2-Wheel-w14GSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
27.399.7ArrayExpressE-MEXP-285-raw-cel-440782853---
26.999.7GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
26.599.7GSM131251AtGen_6-0511_Control-Shoots-12.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
26.599.7GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.499.7GSM142818SS002_ATH1_A10-smith-20hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
26.399.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.199.7GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
25.799.7GSM131376AtGen_6-5512_Genotoxicstress-Shoots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
25.499.6GSM269814T6 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
24.999.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.899.6GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.799.6GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.599.6GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
23.399.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.899.6GSM269812WT leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
21.799.6GSM131464AtGen_6-9512_Heatstress(3h)+9hrecovery-Shoots-12.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
21.799.6GSM269820WT leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
21.699.6GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
21.499.6ArrayExpressE-ATMX-32-raw-cel-1562974443---
21.399.6GSM131252AtGen_6-0512_Control-Shoots-12.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
21.299.6ArrayExpressE-MEXP-546-raw-cel-863289641---
21.099.6GSM269826C2 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
20.999.6GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
20.499.6GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
20.199.6GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.899.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
19.699.6GSM142808SS001_ATH1_A11-Smith-21BGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
19.699.6GSM131375AtGen_6-5511_Genotoxicstress-Shoots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
19.399.6GSM269830T6 leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
19.399.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
18.999.5GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
18.799.5GSM131324AtGen_6-3512_Saltstress-Shoots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
18.399.5ArrayExpressE-ATMX-32-raw-cel-1562974462---
18.299.5GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
18.199.5GSM133730Buchanan-Wollaston_A-2-bwoll-C5G_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
17.199.5ArrayExpressE-MEXP-739-raw-cel-1099467366---
17.099.5GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.399.5ArrayExpressE-TABM-209-raw-cel-1316546503---
15.799.5GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
15.399.4ArrayExpressE-MEXP-739-raw-cel-1099467357---
15.299.4ArrayExpressE-MEXP-285-raw-cel-440782938---
14.999.4GSM1330662503GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
14.699.4GSM142809SS002_ATH1_A1-smith-00hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
14.699.4ArrayExpressE-MEXP-1454-raw-cel-1585858181---
14.599.4GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
14.599.4ArrayExpressE-ATMX-32-raw-cel-1562974425---
14.499.4GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
14.299.4GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
13.699.4GSM260878A1-Greco-BouGSE10322Higher order transcriptional regulation conferred by the bountiful gain of function mutantLink to GEO
13.299.4GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
13.099.4GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.899.3GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
12.699.3GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
12.599.3GSM142810SS002_ATH1_A2-smith-01hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
12.499.3GSM131351AtGen_6-4511_Droughtstress-Shoots-12.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.099.3GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
12.099.3GSM131123AtGen_B-9_1-2-4_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.699.3ArrayExpressE-MEXP-1967-raw-cel-1710625685---
11.199.2GSM260957A5-LLOYD-CON_REP2GSE10326Transcriptome analysis of pho3Link to GEO
11.199.2GSM131432AtGen_6-8512_Woundingstress-Shoots-12.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
11.199.2GSM260958A6-LLOYD-CON_REP3GSE10326Transcriptome analysis of pho3Link to GEO
11.199.2GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
11.099.2GSM142817SS002_ATH1_A9-smith-16hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
10.899.2GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
10.899.2GSM133786Brueggemann_A-4-Brueg-PpH_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic StressLink to GEO
10.799.2GSM131352AtGen_6-4512_Droughtstress-Shoots-12.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
10.299.2ArrayExpressE-MEXP-739-raw-cel-1099467348---
10.299.2GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
9.999.1GSM142841MG001_ATH1_A22-Torres-7N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.999.1GSM268251WT-drought-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
9.899.1GSM142895MW001_ATH1_A3-Wheel-a14_repeatGSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
9.699.1GSM131114AtGen_B-42_3-7-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.499.1GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
8.999.0ArrayExpressE-TABM-209-raw-cel-1316546455---
8.999.0GSM142843MG001_ATH1_A24-Torres-7N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.999.0GSM1330572504GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
8.999.0GSM297379At.StarchSD.WTSS3.SS3R1D0.5GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
8.899.0GSM268252WT-ck-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
8.899.0GSM1330652529GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
8.899.0GSM131800Quick_A110_2-24hr_Rep2m_ATH1GSE5637Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)Link to GEO
8.799.0ArrayExpressE-MEXP-1454-raw-cel-1585858473---
8.699.0GSM131222Kadalayil_1-2_Pasta2M1.1_Rep1_ATH1GSE5619Functional studies of a new Arabidopsis SH2 domain-containing geneLink to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage