Specifically-expressed experiments

Gene ID At2g25450
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Functional description encodes a protein whose sequence is similar to ACC oxidase

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.799.6ArrayExpressE-MEXP-1112-raw-cel-1590665845---
23.399.6ArrayExpressE-MEXP-1112-raw-cel-1590665793---
20.399.6GSM311296Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
18.799.5GSM133817Yang_1-2_old-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
18.599.5ArrayExpressE-MEXP-1112-raw-cel-1590665377---
18.599.5ArrayExpressE-MEXP-1112-raw-cel-1590665429---
17.899.5GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
17.399.5GSM88051csn4-1_mutant replicate 3GSE3865CSN4-1 mutant analysisLink to GEO
15.999.5GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
15.799.5GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.899.4GSM245914csn5 (csn5a-2 csn5b) mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
14.799.4GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
14.799.4GSM245911csn3-1 mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
14.099.4GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
13.399.4GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
13.299.4ArrayExpressE-ATMX-30-raw-cel-1513696906---
13.199.4ArrayExpressE-MEXP-509-raw-cel-829148703---
12.299.3GSM311295Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
11.399.3GSM271060Arabidopsis plant (Col-0), 4h_response to OPDA_rep3GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
11.399.3GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
11.299.2GSM245913csn5 (csn5a-2 csn5b) mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.299.2GSM151703gh3.5-1D 48 hpi, biological replicate 1GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
11.199.2GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
11.099.2GSM245915csn5 (csn5a-2 csn5b) mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.099.2GSM75508Col-0 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
10.899.2GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
10.699.2ArrayExpressE-MEXP-1112-raw-cel-1590666001---
10.599.2GSM151704gh3.5-1D 48 hpi, biological replicate 2GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
10.599.2GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
10.499.2GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
9.999.1GSM75519slr-1 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.799.1GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
9.799.1GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
9.799.1GSM151705gh3.5-1D 48 hpi, biological replicate 3GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
9.699.1ArrayExpressE-ATMX-25-raw-cel-1441077482---
9.699.1GSM75518slr-1 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.499.1GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
9.499.1GSM245910csn3-1 mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
9.399.1GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.399.1GSM74902ice1_no treatment_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
9.299.1GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.199.1ArrayExpressE-MEXP-475-raw-cel-680982521---
9.099.1GSM133733Buchanan-Wollaston_A-5-bwoll-NG1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
8.799.0GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
8.799.0GSM74906ice1_6H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
8.799.0GSM271059Arabidopsis plant (Col-0), 4h_response to OPDA_rep2GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
8.699.0ArrayExpressE-NASC-76-raw-cel-1359878824---



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