Specifically-expressed experiments

Gene ID	At2g24850
Gene name	TAT3 (TYROSINE AMINOTRANSFERASE 3)
Functional description	Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
120.2	99.9	GSM128677	Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
101.0	99.9	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
87.6	99.9	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
85.5	99.9	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
83.4	99.9	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
72.1	99.9	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
69.6	99.9	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
69.4	99.9	ArrayExpress	E-MEXP-546-raw-cel-863289532	-	-	-
68.0	99.9	ArrayExpress	E-MEXP-546-raw-cel-863289476	-	-	-
59.5	99.8	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
58.3	99.8	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
57.9	99.8	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
55.4	99.8	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
54.8	99.8	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
51.6	99.8	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
50.5	99.8	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
48.3	99.8	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
48.2	99.8	GSM128720	Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
48.1	99.8	GSM142832	GM001_ATH1_A9-Torres-3N6_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
47.5	99.8	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
44.9	99.8	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
43.4	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
43.2	99.8	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
42.7	99.8	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
42.2	99.8	GSM271080	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
41.3	99.8	GSM322555	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
41.2	99.8	ArrayExpress	E-MEXP-546-raw-cel-863289693	-	-	-
40.1	99.8	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
39.9	99.8	GSM128675	Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
39.7	99.8	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
39.7	99.8	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
39.3	99.8	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
39.3	99.8	GSM128654	Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
38.2	99.8	GSM133029	BC482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
36.9	99.7	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
36.6	99.7	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
36.5	99.7	GSM152143	siz1-3 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
35.3	99.7	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
35.0	99.7	GSM272992	flu over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
33.9	99.7	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
33.6	99.7	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
32.6	99.7	GSM128655	Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
30.5	99.7	GSM133051	2793	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
30.4	99.7	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
30.1	99.7	GSM134441	St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
30.1	99.7	GSM272988	flu, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
29.0	99.7	GSM142843	MG001_ATH1_A24-Torres-7N6	GSE6176	Impact of Type III effectors on plant defense responses
28.7	99.7	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
28.1	99.7	GSM322550	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
27.9	99.7	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
26.7	99.7	GSM142842	MG001_ATH1_A23-Torres-7N3	GSE6176	Impact of Type III effectors on plant defense responses
25.7	99.7	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
25.1	99.6	ArrayExpress	E-MEXP-98-raw-cel-320189079	-	-	-
25.1	99.6	GSM133050	2791	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
24.9	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
24.8	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467330	-	-	-
24.7	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467312	-	-	-
24.4	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
24.3	99.6	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
23.7	99.6	GSM272987	flu, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
23.6	99.6	GSM157375	Truman_1-3_Pst-DC3000(avrRpm1)-4hpi_Rep1_ATH1	GSE6831	Systemic response to avirulent bacterial infection
23.5	99.6	GSM264763	Tween 0.1% 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
23.1	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467294	-	-	-
23.0	99.6	GSM133037	2508	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
22.8	99.6	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
22.6	99.6	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
22.5	99.6	GSM133053	2794	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
22.5	99.6	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
22.0	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
22.0	99.6	GSM133054	2796	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
21.6	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
21.4	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
19.9	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
19.7	99.6	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
19.3	99.6	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
19.2	99.6	GSM133973	Birnbaum_1-3_src5-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
18.9	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
18.7	99.5	ArrayExpress	E-MEXP-98-raw-cel-320188859	-	-	-
18.6	99.5	GSM133046	2788	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
18.5	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
18.4	99.5	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
18.1	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467339	-	-	-
17.8	99.5	GSM133707	Short_1-3_ozone_Rep2_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
17.7	99.5	GSM133048	2790	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
17.6	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467258	-	-	-
16.2	99.5	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
16.1	99.5	GSM134432	St.Clair_1-57_377_Kin-0_0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
16.0	99.5	GSM133063	2526	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
15.8	99.5	GSM275643	flu_2h	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
15.5	99.5	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
15.4	99.5	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
15.3	99.4	GSM134378	St.Clair_1-39_394_Est_0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
15.2	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
14.7	99.4	ArrayExpress	E-ATMX-25-raw-cel-1441077500	-	-	-
14.4	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467285	-	-	-
14.4	99.4	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
13.9	99.4	GSM264766	paraquat 20mM 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
13.6	99.4	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
13.5	99.4	GSM131065	Hammond_2-6_pho1mutant_Rep3_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
13.3	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
13.1	99.4	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
12.9	99.3	GSM131134	AtGen_B-20_2-6-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
12.8	99.3	GSM134423	St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
12.7	99.3	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
12.5	99.3	GSM131147	AtGen_B-33_3-5-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
12.4	99.3	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
12.3	99.3	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
12.1	99.3	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
12.1	99.3	GSM133705	Short_1-1_ozone_Rep1_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
11.9	99.3	ArrayExpress	E-MEXP-546-raw-cel-863289404	-	-	-
11.8	99.3	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.7	99.3	ArrayExpress	E-ATMX-25-raw-cel-1441077482	-	-	-
11.4	99.3	ArrayExpress	E-MEXP-265-raw-cel-414618093	-	-	-
11.3	99.3	GSM322548	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
11.1	99.2	GSM131146	AtGen_B-32_3-4-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.0	99.2	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
10.9	99.2	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
10.9	99.2	GSM133708	Short_1-5_ozone_Rep3_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
10.9	99.2	GSM152139	Col-0 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
10.9	99.2	GSM297384	At.StarchSD.WTSS3.SS3R2D0.5	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
10.7	99.2	GSM131111	AtGen_B-39_3-4-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.7	99.2	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.6	99.2	GSM142850	MG001_ATH1_A3-Torres-1N6	GSE6176	Impact of Type III effectors on plant defense responses
10.6	99.2	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
10.2	99.2	GSM134422	St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
10.0	99.2	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
9.9	99.1	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
9.9	99.1	GSM131063	Hammond_2-4_pho1mutant_Rep2_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
9.9	99.1	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.8	99.1	GSM133049	2792	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
9.8	99.1	GSM131148	AtGen_B-34_3-6-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.7	99.1	GSM133025	BC181-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
9.7	99.1	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
9.5	99.1	GSM134458	St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
9.5	99.1	ArrayExpress	E-MEXP-711-raw-cel-1563002733	-	-	-
9.5	99.1	GSM264765	paraquat 20mM 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
9.3	99.1	GSM134385	St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.1	99.1	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
9.1	99.1	GSM131132	AtGen_B-18_2-4-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.9	99.0	GSM152137	Col-0 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
8.9	99.0	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
8.8	99.0	GSM131120	AtGen_B-6_1-6-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.8	99.0	ArrayExpress	E-ATMX-34-raw-cel-1563627275	-	-	-
8.7	99.0	GSM157381	Truman_1-9_Pst-DC3000(avrRpm1)-4hpi_Rep3_ATH1	GSE6831	Systemic response to avirulent bacterial infection
8.6	99.0	GSM133064	2528	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
8.6	99.0	ArrayExpress	E-MEXP-98-raw-cel-320189024	-	-	-

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