Specifically-expressed experiments

Gene ID At2g23130
Gene name AGP17 (ARABINOGALACTAN PROTEIN 17)
Functional description AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
46.599.8GSM142815SS002_ATH1_A7-smith-13hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
41.399.8GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
25.799.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
25.099.6GSM269482mkk1, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
24.499.6GSM253156end of the night CGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
23.299.6GSM177128gid1a-1 gid1b-1 gid1c-2 treated for 1 hr with 100 uM GA3, replicate 1GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
22.999.6ArrayExpressE-MEXP-838-raw-cel-1160704054---
22.399.6GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
21.599.6GSM269488mkk2, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
20.399.6ArrayExpressE-MEXP-838-raw-cel-1160704020---
19.499.6GSM177125gid1a-1 gid1b-1 gid1c-2 mock treated for 1 hr, replicate 1GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
18.099.5GSM128651Underwood_1-4_Cor-hrpS-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.799.5GSM1330682530GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
17.699.5GSM177121ga-1 (SALK_109115) mock treated for 1 hr, replicate 3GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
17.499.5GSM1330562798GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
17.299.5GSM269490mkk2, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
16.999.5GSM142781AM002_ATH1_A6-MCCOR-WDBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
16.899.5ArrayExpressE-MEXP-1573-raw-cel-1617523313---
16.499.5GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.099.5GSM131158AtGen_C-8_2-C-24_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
15.799.5GSM297391At.StarchSD.WTSS3.WTR1D8GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
15.399.4GSM131145AtGen_B-31_3-3-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.299.4GSM133255RIKEN-GODA12A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
15.199.4GSM133251RIKEN-GODA10A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
14.999.4GSM128750De Veylder_1-2_wildtype_Rep2_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
14.399.4GSM269484mkk1, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
14.199.4GSM142664NE001_ATH1_A2-Evans-w30GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
13.899.4GSM269489mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
13.799.4GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
13.799.4GSM142778AM002_ATH1_A3-MCCOR-GFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
13.399.4ArrayExpressE-MEXP-1725-raw-cel-1669614603---
13.299.4ArrayExpressE-MEXP-1725-raw-cel-1669614613---
13.299.4GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.199.4GSM177130gid1a-1 gid1b-1 gid1c-2 treated for 1 hr with 100 uM GA3, replicate 3GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
13.199.4GSM133254RIKEN-GODA11B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
12.999.3GSM131511ATGE_13_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
12.799.3ArrayExpressE-MEXP-1256-raw-cel-1502196386---
12.799.3GSM133272RIKEN-GODA7B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
12.499.3ArrayExpressE-MEXP-98-raw-cel-320188804---
12.399.3GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
12.399.3GSM216895ga1-3_shoots_1h_water_repl3GSE8739Early gibberellin responses in ArabidopsisLink to GEO
12.199.3GSM142613DV001_ATH1_A8-degra-EghGSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
12.199.3GSM177119ga-1 (SALK_109115) mock treated for 1 hr, replicate 1GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
11.899.3GSM131131AtGen_B-17_2-3-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.899.3GSM131143AtGen_B-29_3-1-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.799.3GSM142805SS001_ATH1_A8-Smith-11GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
11.799.3GSM142608DV001_ATH1_A3-degra-Cgh_repeat2GSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
11.799.3GSM142609DV001_ATH1_A4-degra-Cg1_repeat2GSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
11.699.3GSM133273RIKEN-GODA8A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
11.599.3GSM157299JPritchard_A-1_CTR_Rep1_ATH1GSE6823The molecular basis of plant insect interactionsLink to GEO
11.599.3ArrayExpressE-MEXP-546-raw-cel-863289246---
11.499.3ArrayExpressE-ATMX-3-raw-cel-1161357872---
11.299.2GSM157383Sakakibara_1-2_TZ-treatment-wild_Rep2_ATH1GSE6832Cytokinin treatment on aerial parts of seedlingsLink to GEO
11.299.2GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
11.199.2GSM133276RIKEN-GODA9B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
11.199.2GSM142773AM002_ATH1_A8-MCCOR-GDBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
10.999.2ArrayExpressE-MEXP-546-raw-cel-863289298---
10.899.2GSM131489ATGE_100_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
10.799.2GSM128659Underwood_1-12_Mock-Inoculum-24h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.599.2ArrayExpressE-MEXP-1573-raw-cel-1617523345---
10.499.2ArrayExpressE-MEXP-1344-raw-cel-1559561713---
10.199.2ArrayExpressE-MEXP-838-raw-cel-1160703990---
10.199.2GSM131130AtGen_B-16_2-2-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.199.2GSM268010Col-0, Time 0, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
9.999.1GSM177126gid1a-1 gid1b-1 gid1c-2 mock treated for 1 hr, replicate 2GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
9.999.1GSM142777AM002_ATH1_A2-MCCOR-WDAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
9.999.1GSM177120ga-1 (SALK_109115) mock treated for 1 hr, replicate 2GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
9.999.1GSM133406Bramke_A6-warre-S2WGSE5711Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.Link to GEO
9.999.1GSM142804SS001_ATH1_A7-Smith-10GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
9.899.1ArrayExpressE-MEXP-1400-raw-cel-1575804007---
9.799.1GSM157386Sakakibara_1-5_TZ-treatment-mutant_Rep2_ATH1GSE6832Cytokinin treatment on aerial parts of seedlingsLink to GEO
9.799.1GSM133269RIKEN-GODA6A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.699.1GSM128657Underwood_1-10_Mock-Inoculum-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.699.1ArrayExpressE-MEXP-546-raw-cel-863289325---
9.599.1ArrayExpressE-MEXP-1400-raw-cel-1575803647---
9.599.1GSM131129AtGen_B-15_2-1-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.499.1GSM142776AM002_ATH1_A1-MCCOR-WFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
9.499.1GSM157300JPritchard_A-2_CTR_Rep2_ATH1GSE6823The molecular basis of plant insect interactionsLink to GEO
9.399.1GSM128723Pieterse_1-9_Prapae-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
9.299.1ArrayExpressE-MEXP-1100-raw-cel-1378752196---
9.299.1ArrayExpressE-ATMX-25-raw-cel-1441077398---
9.199.1GSM216896ga1-3_shoots_1h_water_repl4GSE8739Early gibberellin responses in ArabidopsisLink to GEO
9.199.1ArrayExpressE-MEXP-1725-raw-cel-1669614572---
9.199.1GSM177127gid1a-1 gid1b-1 gid1c-2 mock treated for 1 hr, replicate 3GSE7353Early GA response genes in Arabidopsis thalianaLink to GEO
9.099.1GSM142779AM002_ATH1_A4-MCCOR-GDAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
9.099.1GSM131157AtGen_C-7_1-C-24_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
8.999.0GSM142614DV001_ATH1_A9-degra-Eg1_repeat2GSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
8.999.0ArrayExpressE-MEXP-1100-raw-cel-1378752164---
8.899.0GSM131515ATGE_14_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
8.899.0GSM157387Sakakibara_1-6_TZ-treatment-mutant_Rep3_ATH1GSE6832Cytokinin treatment on aerial parts of seedlingsLink to GEO
8.699.0GSM131328AtGen_6-3612_Saltstress-Shoots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
8.699.0GSM133782Brueggemann_A-6-Brueg-Pps_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic StressLink to GEO



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