Specifically-expressed experiments

Gene ID At2g22880
Gene name VQ motif-containing protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
131.899.9ArrayExpressE-MEXP-807-raw-cel-1173272948---
79.399.9ArrayExpressE-MEXP-1443-raw-cel-1581869863---
75.999.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
73.999.9GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
73.999.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
73.199.9ArrayExpressE-MEXP-807-raw-cel-1173273144---
72.199.9GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
70.799.9ArrayExpressE-MEXP-1094-raw-cel-1379507313---
67.599.8ArrayExpressE-MEXP-807-raw-cel-1173273116---
64.099.8GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
63.899.8ArrayExpressE-MEXP-1094-raw-cel-1379507273---
61.699.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
60.299.8ArrayExpressE-MEXP-1443-raw-cel-1581869632---
58.899.8ArrayExpressE-MEXP-1094-raw-cel-1379507553---
54.999.8GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
54.799.8GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
53.899.8ArrayExpressE-MEXP-807-raw-cel-1173273060---
53.699.8GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
50.699.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
49.699.8GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
49.399.8ArrayExpressE-MEXP-1443-raw-cel-1581869921---
48.799.8GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
48.799.8GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
44.999.8GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
44.299.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
43.699.8GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
43.499.8GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
43.199.8ArrayExpressE-MEXP-547-raw-cel-863346403---
42.999.8GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
42.599.8GSM133812Diamond_A-1-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
42.299.8GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
41.799.8ArrayExpressE-MEXP-807-raw-cel-1173273170---
41.699.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
37.599.7ArrayExpressE-MEXP-807-raw-cel-1173273252---
37.499.7GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
37.099.7GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
36.699.7ArrayExpressE-MEXP-1094-raw-cel-1379507513---
35.999.7GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
35.599.7GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
35.599.7GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
35.499.7GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
34.899.7GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
34.499.7GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
32.899.7GSM133814Diamond_A-3-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
32.399.7GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
32.199.7GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
32.199.7GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.099.7ArrayExpressE-MEXP-1094-raw-cel-1379507233---
31.199.7GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
30.699.7ArrayExpressE-MEXP-98-raw-cel-320188859---
29.999.7GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
29.599.7GSM48127Col_CSC3GSE2538Chitin Oligomer ExperimentLink to GEO
29.499.7ArrayExpressE-MEXP-1443-raw-cel-1581869688---
29.299.7ArrayExpressE-NASC-76-raw-cel-1359879132---
28.999.7GSM131146AtGen_B-32_3-4-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
28.399.7GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
28.099.7GSM133815Diamond_A-4-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
27.899.7ArrayExpressE-MEXP-1443-raw-cel-1581869745---
26.699.7GSM131119AtGen_B-5_1-5-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
26.499.7GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
26.399.7GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
26.299.7ArrayExpressE-MEXP-807-raw-cel-1173273088---
26.099.7GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
25.499.6ArrayExpressE-MEXP-547-raw-cel-863346376---
25.299.6GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
25.299.6GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
25.199.6ArrayExpressE-MEXP-807-raw-cel-1173272832---
24.999.6GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
24.999.6GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
24.899.6GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
24.699.6ArrayExpressE-MEXP-1094-raw-cel-1379507193---
24.599.6GSM131118AtGen_B-4_1-4-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
23.699.6ArrayExpressE-NASC-76-raw-cel-1359878900---
23.599.6ArrayExpressE-MEXP-807-raw-cel-1173273223---
23.499.6ArrayExpressE-ATMX-28-raw-cel-1441104826---
23.499.6GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
23.199.6GSM131148AtGen_B-34_3-6-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
23.099.6ArrayExpressE-NASC-76-raw-cel-1359878976---
22.499.6ArrayExpressE-MEXP-98-raw-cel-320188804---
22.199.6GSM142645MC002_ATH1_A8.2-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
21.999.6ArrayExpressE-MEXP-98-raw-cel-320189024---
21.199.6GSM133969Birnbaum_1-20_LRC-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
21.199.6GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.899.6GSM142647MC002_ATH1_A9.1-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
20.699.6GSM131117AtGen_B-3_1-3-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.699.6GSM131131AtGen_B-17_2-3-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.499.6GSM142646MC002_ATH1_A8.3-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
20.499.6ArrayExpressE-MEXP-547-raw-cel-863346421---
20.399.6ArrayExpressE-NASC-76-raw-cel-1359879158---
20.299.6GSM48123Col_8mer2GSE2538Chitin Oligomer ExperimentLink to GEO
19.699.6GSM184559Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.099.5GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
18.799.5ArrayExpressE-ATMX-28-raw-cel-1441104835---
18.699.5GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.599.5GSM48124Col_8mer3GSE2538Chitin Oligomer ExperimentLink to GEO
18.499.5GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
18.499.5GSM48122Col_8mer1GSE2538Chitin Oligomer ExperimentLink to GEO
17.499.5GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.299.5GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
17.199.5GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
17.199.5GSM206274Wild type, chitooctaose treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
16.999.5GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
16.899.5GSM131115AtGen_B-1_1-1-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
16.799.5ArrayExpressE-MEXP-81-raw-cel-295433164---
16.799.5ArrayExpressE-MEXP-98-raw-cel-320189079---
16.299.5GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
16.299.5GSM206275Wild type, chitooctaose treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
16.199.5ArrayExpressE-MEXP-547-raw-cel-863346448---
16.099.5ArrayExpressE-MEXP-1443-raw-cel-1581869803---
16.099.5GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
15.899.5GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
15.599.5GSM131145AtGen_B-31_3-3-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.299.4GSM131135AtGen_B-21_2-7-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.199.4GSM184553Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.099.4GSM142654MC002_ATH1_A11.2-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
14.099.4GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.799.4GSM218594Whole roots 3.5hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.599.4GSM142653MC002_ATH1_A11.1-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.599.4ArrayExpressE-MEXP-1725-raw-cel-1669614613---
13.599.4ArrayExpressE-MEXP-81-raw-cel-295433280---
13.199.4GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.199.4GSM184557Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.099.4GSM131143AtGen_B-29_3-1-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
12.699.3ArrayExpressE-MEXP-1094-raw-cel-1379507433---
12.599.3GSM206276Wild type, chitooctaose treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
12.399.3GSM218591Whole roots 3.5hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.299.3ArrayExpressE-MEXP-546-raw-cel-863289450---
12.299.3GSM131133AtGen_B-19_2-5-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
12.299.3ArrayExpressE-NASC-76-raw-cel-1359879106---
12.299.3GSM142832GM001_ATH1_A9-Torres-3N6_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.099.3GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
12.099.3GSM142879GW001_ATH1_A24-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
11.999.3GSM131121AtGen_B-7_1-7-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.899.3GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.499.3GSM142878GW001_ATH1_A23-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
11.499.3GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.299.2GSM131116AtGen_B-2_1-2-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.299.2ArrayExpressE-MEXP-546-raw-cel-863289404---
11.099.2GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
11.099.2ArrayExpressE-NASC-76-raw-cel-1359879028---
10.999.2ArrayExpressE-MEXP-807-raw-cel-1173273005---
10.999.2GSM131130AtGen_B-16_2-2-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.499.2GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.399.2ArrayExpressE-MEXP-546-raw-cel-863289506---
10.199.2ArrayExpressE-MEXP-449-raw-cel-676423187---
10.099.2ArrayExpressE-MEXP-1725-raw-cel-1669614572---
9.999.1GSM184635Arabidopsis, root cells, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
9.799.1GSM131129AtGen_B-15_2-1-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.499.1ArrayExpressE-MEXP-807-raw-cel-1173273196---
9.399.1ArrayExpressE-MEXP-807-raw-cel-1173272921---
9.299.1GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
8.999.0GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
8.899.0GSM157358Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
8.899.0ArrayExpressE-MEXP-1094-raw-cel-1379507473---



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