Specifically-expressed experiments

Gene ID	At2g22770
Gene name	NAI1
Functional description	regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
42.9	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
36.1	99.7	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
33.2	99.7	GSM131170	AtGen_D-2_1-FL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
31.7	99.7	GSM291024	root - 08% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
30.7	99.7	GSM131200	AtGen_D-34_3-FL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
28.8	99.7	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
28.7	99.7	GSM131202	AtGen_D-36_3-RL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
27.2	99.7	GSM133989	Birnbaum_1-22_gl2-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
25.0	99.6	GSM131176	AtGen_D-8_1-WL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
24.3	99.6	GSM131171	AtGen_D-3_1-PL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
23.9	99.6	GSM131203	AtGen_D-37_3-BL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
23.4	99.6	GSM291119	root - 21% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
23.3	99.6	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
22.7	99.6	GSM133138	S1500_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
22.5	99.6	GSM131173	AtGen_D-5_1-BL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
22.4	99.6	GSM133126	S0_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
21.7	99.6	GSM142672	SF001_ATH1_A2-Fille-WT-+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
21.2	99.6	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
21.0	99.6	GSM131187	AtGen_D-20_2-RL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
20.6	99.6	GSM142671	SF001_ATH1_A1-Fille-WT-nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
20.2	99.6	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
20.0	99.6	GSM131180	AtGen_D-12_1-RS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
19.8	99.6	GSM133141	S1500_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
19.8	99.6	GSM128675	Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.4	99.6	GSM142670	SF002_ATH1_A8-Fille-ANGR4-12+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
19.3	99.6	GSM131206	AtGen_D-40_3-WL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
18.9	99.5	GSM142669	SF002_ATH1_A7-Fille-ANGR4-12nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
18.4	99.5	GSM133128	S0_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
18.1	99.5	GSM133135	S1500_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
17.9	99.5	GSM131181	AtGen_D-13_1-BS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.9	99.5	GSM131174	AtGen_D-6_1-AL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.8	99.5	GSM131212	AtGen_D-46_3-AS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.5	99.5	GSM131191	AtGen_D-24_2-WL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.4	99.5	GSM131194	AtGen_D-28_2-RS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.3	99.5	GSM133140	S1500_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
16.5	99.5	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.5	99.5	GSM142674	SF002_ATH1_A5-Fille-WTnodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
16.3	99.5	GSM131437	AtGen_6-8621_Woundingstress-Roots-24.0h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
15.9	99.5	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
15.7	99.5	GSM131205	AtGen_D-39_3-UL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
15.7	99.5	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
15.4	99.5	GSM131172	AtGen_D-4_1-RL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
15.3	99.4	GSM142673	SF001_ATH1_A3-Fille-ANGR4-12	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
15.1	99.4	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
15.0	99.4	GSM131185	AtGen_D-18_2-FL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
15.0	99.4	GSM131196	AtGen_D-30_2-AS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
14.9	99.4	GSM131182	AtGen_D-14_1-AS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
14.7	99.4	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
14.7	99.4	GSM131198	AtGen_D-32_2-WS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
14.7	99.4	GSM290758	root - 01% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.4	99.4	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
14.3	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
14.2	99.4	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
14.2	99.4	GSM131175	AtGen_D-7_1-UL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
14.1	99.4	GSM133129	S0_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.1	99.4	GSM131570	ATGE_98_A	GSE5631	AtGenExpress: Developmental series (roots)
14.1	99.4	GSM133137	S1500_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.1	99.4	GSM291023	root - 08% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.0	99.4	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.0	99.4	GSM142675	SF002_ATH1_A6-Fille-WT+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
13.8	99.4	GSM131211	AtGen_D-45_3-BS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
13.7	99.4	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
13.7	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937578	-	-	-
13.5	99.4	GSM131214	AtGen_D-48_3-WS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
13.3	99.4	GSM131188	AtGen_D-21_2-BL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.1	99.4	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
13.1	99.4	GSM299330	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
13.0	99.4	GSM133969	Birnbaum_1-20_LRC-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
12.9	99.3	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
12.8	99.3	GSM131362	AtGen_6-5122_Genotoxicstress-Roots-0.5h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
12.8	99.3	GSM131197	AtGen_D-31_2-US_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
12.8	99.3	GSM299340	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 2 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
12.8	99.3	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
12.7	99.3	GSM131216	AtGen_D-26_1-FS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
12.6	99.3	GSM218591	Whole roots 3.5hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.5	99.3	GSM131354	AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
12.2	99.3	GSM131215	AtGen_D-17_2-DL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
12.2	99.3	GSM131184	AtGen_D-16_1-WS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
12.2	99.3	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
12.2	99.3	GSM291114	root - 21% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.2	99.3	GSM184559	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.0	99.3	GSM142697	MH001_ATH1_A11-grevi-AT2	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
11.9	99.3	GSM184487	Epidermis&Cortex root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.8	99.3	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
11.8	99.3	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
11.7	99.3	GSM131337	AtGen_6-4121_Droughtstress-Roots-0.5h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
11.7	99.3	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
11.6	99.3	ArrayExpress	E-MEXP-791-raw-cel-1122937614	-	-	-
11.5	99.3	GSM142695	MH001_ATH1_A9-grevi-CT3	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
11.4	99.3	GSM299409	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
11.3	99.3	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
10.9	99.2	GSM218594	Whole roots 3.5hr KNO3 treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.7	99.2	ArrayExpress	E-MEXP-791-raw-cel-1122937596	-	-	-
10.7	99.2	GSM133142	S1500_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.5	99.2	GSM299325	Wild Type Germinating Seeds With Solvent Treatment Only Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
10.4	99.2	GSM142693	MH001_ATH1_A7-grevi-CT1	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
10.4	99.2	GSM131189	AtGen_D-22_2-AL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
10.4	99.2	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
10.3	99.2	GSM131190	AtGen_D-23_2-UL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
10.3	99.2	GSM184552	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.2	99.2	GSM299332	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
10.2	99.2	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.0	99.2	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
9.9	99.1	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.9	99.1	GSM299408	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.8	99.1	GSM131361	AtGen_6-5121_Genotoxicstress-Roots-0.5h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
9.8	99.1	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	GSM133707	Short_1-3_ozone_Rep2_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
9.8	99.1	GSM131422	AtGen_6-8225_Woundingstress-Roots-1.0h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
9.8	99.1	GSM133123	S0_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.7	99.1	GSM133717	Urwin_A-1-Urwin-Con_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
9.6	99.1	GSM131571	ATGE_98_B	GSE5631	AtGenExpress: Developmental series (roots)
9.4	99.1	GSM131193	AtGen_D-27_2-PS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.4	99.1	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.4	99.1	GSM131349	AtGen_6-4421_Droughtstress-Roots-6.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.4	99.1	GSM157363	Ulker_2-6_WRKY-KO-13-Pst-DC3000_Rep1_ATH1	GSE6829	Group II-A WRKY transcription factors and early leaf senescence
9.3	99.1	GSM131421	AtGen_6-8224_Woundingstress-Roots-1.0h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
9.3	99.1	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.3	99.1	GSM299336	Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.3	99.1	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.2	99.1	GSM128748	Edwards_3-4_fri-flc2_Rep2_ATH1	GSE5528	Identifying targets of FLC at 27oC
9.1	99.1	GSM133136	S1500_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.1	99.1	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
9.1	99.1	GSM131346	AtGen_6-4322_Droughtstress-Roots-3.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.0	99.1	GSM131350	AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.0	99.1	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.0	99.1	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
8.9	99.0	GSM299341	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
8.9	99.0	GSM299327	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
8.9	99.0	GSM131314	AtGen_6-3222_Saltstress-Roots-1.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
8.8	99.0	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation

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