Specifically-expressed experiments

Gene ID At2g18550
Gene name HB-2 (HOMEOBOX-2)
Functional description Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
196.0100.0GSM62704arf6 arf8 flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
190.9100.0GSM242960Steroid day 3 (day3D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
182.8100.0GSM242961Mock day 7 (day7E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
176.3100.0GSM242962Mock day 7 (day7E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
152.599.9ArrayExpressE-MEXP-148-raw-cel-350529179---
117.199.9GSM242956Steroid day 1 (day1D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
107.699.9GSM242964Steroid day 7 (day7D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
105.199.9GSM242963Steroid day 7 (day7D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
104.099.9GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
97.199.9ArrayExpressE-MEXP-148-raw-cel-350529268---
81.699.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
74.299.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
72.599.9GSM242957Mock day 3 (day3E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
71.699.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
70.399.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
66.799.8GSM62703arf6 arf8 flowers_stage 11-12GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
64.999.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
64.799.8GSM242954Mock day 1 (day1E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
61.499.8GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
57.499.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
56.899.8GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
55.299.8GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
55.099.8GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
54.999.8GSM311293Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
51.899.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
51.899.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
51.799.8GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
51.499.8GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
50.499.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
49.899.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
47.299.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
47.199.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
46.399.8GSM242953Mock day 1 (day1E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
45.599.8GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
44.399.8GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
43.499.8GSM131302AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
42.599.8GSM10478lec1-1 24-Hr Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
40.099.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
39.599.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
39.599.8GSM253197RGA-GR-MOCK-REP3GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
39.199.8GSM253195RGA-GR-MOCK-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
36.799.7GSM311294Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
36.399.7GSM131293AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
33.899.7GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
33.199.7ArrayExpressE-MEXP-148-raw-cel-350528647---
32.999.7GSM62692arf6 arf8 flowers_stage 1-14_untreatedGSE2847Auxin induction in wild type and arf6 arf8 flowersLink to GEO
31.799.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
31.599.7GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
31.199.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
30.499.7GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
29.899.7GSM62693arf6 arf8 flowers_stage 1-14_IAAGSE2847Auxin induction in wild type and arf6 arf8 flowersLink to GEO
29.699.7GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
29.299.7GSM131298AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
27.799.7GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
25.899.7GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.499.6GSM131294AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
24.099.6GSM253198RGA-GR-DEX-REP3GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
23.699.6GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
22.699.6GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
21.399.6GSM260884Ward_A1-WARD-ax3_SLDGSE10324Identification of genes differentially expressed in dormant versus active axillary shoot apical mersitemsLink to GEO
21.099.6GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
20.999.6GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
20.699.6GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
20.699.6GSM131286AtGen_6-2122_Osmoticstress-Roots-0.5h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
19.999.6GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
18.899.5GSM128729Hennig_1-1_flower-buds-CK_021114_1_A_Rep1_ATH1GSE5526Transcriptional Programs of Early Reproductive Stages in ArabidopsisLink to GEO
18.199.5GSM253196RGA-GR-DEX-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
17.799.5ArrayExpressE-MEXP-148-raw-cel-350528559---
17.499.5GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
17.199.5GSM47019Ler 9GSE2473Small RNA biogenesis mutantsLink to GEO
16.299.5GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
15.899.5GSM10445WT 24-Hr Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
15.899.5ArrayExpressE-MEXP-509-raw-cel-829148597---
15.399.4GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.299.4GSM10449WT Cotyledon Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
15.199.4GSM253193RGA-GR-MOCK-REP1GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
13.999.4GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
13.799.4GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
13.399.4GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.899.3GSM131290AtGen_6-2222_Osmoticstress-Roots-1.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
12.699.3GSM10480lec1-1 Cotyledon Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
12.199.3GSM131309AtGen_6-3121_Saltstress-Roots-0.5h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.099.3ArrayExpressE-MEXP-509-raw-cel-829148913---
11.999.3ArrayExpressE-MEXP-509-raw-cel-829148561---
11.799.3GSM62690arf6/arf6 ARF8/arf8 flowers_stage 1-14_untreatedGSE2847Auxin induction in wild type and arf6 arf8 flowersLink to GEO
11.699.3GSM10479lec1-1 Cotyledon Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
11.699.3GSM131310AtGen_6-3122_Saltstress-Roots-0.5h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
11.499.3GSM62691arf6/arf6 ARF8/arf8 flowers_stage 1-14_IAAGSE2847Auxin induction in wild type and arf6 arf8 flowersLink to GEO
11.299.2ArrayExpressE-MEXP-509-raw-cel-829148772---
11.299.2ArrayExpressE-MEXP-509-raw-cel-829148420---
10.999.2ArrayExpressE-MEXP-509-raw-cel-829148090---
10.399.2GSM131285AtGen_6-2121_Osmoticstress-Roots-0.5h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
10.399.2ArrayExpressE-MEXP-509-raw-cel-829148385---
10.299.2GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
10.199.2GSM142600BD001_ATH1_A4-DAVIE-T13GSE6149Targets of the mci genes.Link to GEO
10.099.2ArrayExpressE-MEXP-509-raw-cel-829148632---
9.999.1ArrayExpressE-MEXP-509-raw-cel-829148877---
9.999.1GSM253200Nontransgenic(ga1-3rgargl2)-DEX-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
9.999.1ArrayExpressE-MEXP-509-raw-cel-829148525---
9.899.1GSM131289AtGen_6-2221_Osmoticstress-Roots-1.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.799.1ArrayExpressE-MEXP-509-raw-cel-829148842---
9.599.1GSM253194RGA-GR-DEX-REP1GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
9.399.1ArrayExpressE-MEXP-509-raw-cel-829148201---
9.399.1GSM131453AtGen_6-9321_Heatstress-Roots-3.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
9.099.1ArrayExpressE-MEXP-509-raw-cel-829148165---
8.899.0GSM142604BD001_ATH1_A8-Davie-HET_repeatGSE6149Targets of the mci genes.Link to GEO
8.799.0GSM184632Arabidopsis, whole roots, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO



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