Specifically-expressed experiments

Gene ID At2g17440
Gene name leucine-rich repeat family protein
Functional description F:protein binding;P:unknown;C:plasma membrane;MPBOFVA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.299.8GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
38.199.8GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
37.999.8GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
30.299.7GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
28.499.7GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
28.199.7GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
27.899.7GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
26.499.7GSM184897Arabidopsis, root cells, cortex, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
26.499.7GSM179970Arabidopsis aux1 mutant roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
26.299.7GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
25.199.6GSM179963Arabidopsis aux1 mutant roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
24.799.6GSM184915Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
24.799.6GSM179959Arabidopsis roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
24.599.6GSM179967Arabidopsis aux1 mutant roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
23.999.6GSM179974Arabidopsis roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
22.499.6GSM184896Arabidopsis, root cells, cortex, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
22.199.6GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
21.099.6GSM179972Arabidopsis roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
20.599.6GSM179971Arabidopsis roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
20.399.6GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
20.099.6GSM184921Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
19.499.6GSM75508Col-0 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
19.499.6GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
19.199.6GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
18.699.5GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
18.399.5GSM179973Arabidopsis roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
18.199.5GSM131564ATGE_94_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
17.999.5GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
16.699.5GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
16.099.5GSM133892Schroeder_1-6_JS43-control-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
15.299.4GSM290828root - 04% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
15.299.4GSM291128root - 08% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
13.899.4GSM179977Arabidopsis ein2 mutant roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
13.399.4GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
13.399.4GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
13.199.4GSM184634Arabidopsis, root cells, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
13.199.4GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.999.3GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.999.3GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.799.3GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
12.799.3GSM290827root - 04% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.499.3GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
12.499.3GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
12.199.3GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
12.099.3GSM282700Col_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
12.099.3GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
12.099.3GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
12.099.3GSM179976Arabidopsis ein2 mutant roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.999.3GSM31920535S-MIF1 line #124, dark grown, replicate1GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
11.999.3GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
11.899.3GSM131429AtGen_6-8423_Woundingstress-Roots-6.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
11.899.3GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
11.799.3GSM179978Arabidopsis ein2 mutant roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.699.3GSM131565ATGE_94_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.599.3GSM226268WT(Ler)_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
11.499.3GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
11.099.2GSM266671Arabidopsis, root cells, cortex, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
11.099.2GSM282696arf2_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.999.2GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
10.899.2GSM157330Coates_1-2_ara1OX_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.699.2GSM282702Col_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.699.2GSM319209Dark-grown WT control (vector#4) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
10.499.2GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.399.2GSM157331Coates_1-3_Col-3_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.399.2GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.299.2GSM184919Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.299.2GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.299.2GSM75519slr-1 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
10.299.2GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
10.199.2GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.199.2GSM184920Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.099.2GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.099.2GSM291118root - 21% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
10.099.2GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.999.1GSM282694arf2_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.999.1GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.999.1GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.899.1GSM184895Arabidopsis, root cells, cortex, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.899.1GSM291098root - 08% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.699.1GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
9.599.1GSM231204chl1 at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
9.599.1GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.499.1GSM231201chl1 at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
9.499.1GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.499.1GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.499.1GSM291124root - 21% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.499.1GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.399.1GSM133726McCormac_1-4_wildtype-NFtreated_Rep2_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
9.399.1GSM157335Coates_1-7_Col-3_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.399.1GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
9.199.1GSM252692Section of Root from 270 mm to 340 mm harvested immediately rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.199.1GSM133891Schroeder_1-3_JS45-control-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
9.099.1GSM226271phyAphyB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
8.999.0GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
8.999.0GSM133728McCormac_1-6_mutant-NFtreated_Rep2_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
8.999.0GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
8.999.0GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
8.999.0GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
8.899.0GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.799.0GSM231198wild-type at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
8.699.0GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO



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