Specifically-expressed experiments

Gene ID At1g77760
Gene name NIA1 (NITRATE REDUCTASE 1)
Functional description Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
48.199.8ArrayExpressE-MEXP-828-raw-cel-1156922794---
43.999.8GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
39.699.8GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
39.099.8ArrayExpressE-MEXP-828-raw-cel-1156922708---
38.499.8GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
37.599.7ArrayExpressE-MEXP-828-raw-cel-1156922613---
35.399.7GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
31.499.7ArrayExpressE-MEXP-828-raw-cel-1156922829---
31.099.7ArrayExpressE-MEXP-828-raw-cel-1156922750---
26.799.7ArrayExpressE-MEXP-828-raw-cel-1156922968---
24.599.6ArrayExpressE-MEXP-828-raw-cel-1156922987---
24.399.6ArrayExpressE-MEXP-828-raw-cel-1156922318---
23.699.6ArrayExpressE-MEXP-828-raw-cel-1156922731---
22.399.6ArrayExpressE-MEXP-828-raw-cel-1156922772---
20.499.6ArrayExpressE-MEXP-828-raw-cel-1156922533---
19.799.6ArrayExpressE-MEXP-828-raw-cel-1156922923---
19.799.6GSM184490Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.399.6ArrayExpressE-MEXP-828-raw-cel-1156922455---
19.399.6GSM184492Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.199.6ArrayExpressE-MEXP-828-raw-cel-1156922846---
19.099.5ArrayExpressE-MEXP-828-raw-cel-1156922944---
18.699.5ArrayExpressE-MEXP-828-raw-cel-1156922368---
18.599.5GSM184534Protoplasted root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.599.5GSM184491Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.299.5ArrayExpressE-MEXP-828-raw-cel-1156922595---
18.099.5ArrayExpressE-MEXP-828-raw-cel-1156922485---
17.899.5GSM184511Pericycle root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.599.5GSM157310Gan_1-6_mutant-nitrate-continuous(ANC)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
17.199.5ArrayExpressE-MEXP-828-raw-cel-1156922572---
16.799.5ArrayExpressE-MEXP-828-raw-cel-1156922509---
16.099.5GSM184489Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.099.5GSM184479Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.899.5GSM128760Mittler_2-4_wildtype+H2O2_Rep1_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
15.799.5GSM157309Gan_1-5_wildtype-nitrate-continuous(WNC)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
15.799.5GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.699.5ArrayExpressE-TABM-63-raw-cel-681137195---
14.899.4GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.799.4ArrayExpressE-MEXP-828-raw-cel-1156922342---
14.699.4GSM218591Whole roots 3.5hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.199.4ArrayExpressE-TABM-63-raw-cel-681137124---
13.899.4GSM128762Mittler_2-6_wildtype+H2O2_Rep3_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
13.899.4GSM128761Mittler_2-5_wildtype+H2O2_Rep2_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
13.699.4ArrayExpressE-MEXP-715-raw-cel-1121836334---
12.999.3GSM158706WT-ESTRADIOL-REP2GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
12.799.3GSM184536Protoplasted root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.799.3GSM226277WT(Ler)_Rc15_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
12.799.3GSM128766Mittler_2-10_Zat12+H2O2_Rep1_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
12.699.3GSM184503Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.499.3ArrayExpressE-MEXP-1400-raw-cel-1575804187---
12.399.3GSM184501Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.299.3GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.199.3GSM133893Schroeder_1-9_JS46-starve-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
11.799.3GSM226279WT(Ler)_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
11.699.3GSM128763Mittler_2-7_Zat12_Rep1_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
11.699.3GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.599.3ArrayExpressE-MEXP-828-raw-cel-1156922467---
11.599.3ArrayExpressE-MEXP-828-raw-cel-1156922891---
11.499.3GSM218594Whole roots 3.5hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.399.3GSM157144Seedling_WT_rep1GSE6812Gene expression in wild-type and transgenic plants overexpressing rice OsTOP6A1 geneLink to GEO
11.399.3GSM226281YHB_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
11.199.2GSM184507Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.099.2GSM226278WT(Ler)_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
10.999.2ArrayExpressE-MEXP-828-raw-cel-1156922872---
10.799.2ArrayExpressRente_1-1_WS2-HO_Rep1_ATH1---
10.799.2GSM133894Schroeder_1-12_JS44-starve-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
10.799.2GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.699.2GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.599.2GSM2454662 hr Non-Stress Total RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
10.499.2GSM133892Schroeder_1-6_JS43-control-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
10.499.2GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.399.2GSM133140S1500_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.299.2ArrayExpressE-TABM-63-raw-cel-681137015---
9.999.1GSM218588Protoplasted root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.999.1ArrayExpressE-MEXP-715-raw-cel-1121836361---
9.999.1GSM157149Seedling_OETOP6A1_rep3GSE6812Gene expression in wild-type and transgenic plants overexpressing rice OsTOP6A1 geneLink to GEO
9.999.1GSM13778DexamethasoneGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
9.999.1ArrayExpressE-TABM-63-raw-cel-681137052---
9.899.1GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.699.1GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.699.1GSM2454772 hr Hypoxia Stress Total RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
9.499.1GSM158702HY213-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
9.499.1GSM128757Mittler_2-1_wildtype_Rep1_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
9.499.1GSM128767Mittler_2-11_Zat12+H2O2_Rep2_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
9.499.1GSM206276Wild type, chitooctaose treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
9.399.1ArrayExpressE-MEXP-1304-raw-cel-1530618445---
9.299.1GSM128759Mittler_2-3_wildtype_Rep3_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
9.299.1GSM158705HY213-ESTRADIOL-REP2GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
9.299.1GSM158704HY213-MOCK-REP2GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
9.199.1GSM226280YHB_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
9.199.1GSM157145Seedling_WT_rep2GSE6812Gene expression in wild-type and transgenic plants overexpressing rice OsTOP6A1 geneLink to GEO
9.099.1GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.099.1GSM128765Mittler_2-9_Zat12_Rep3_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
9.099.1GSM184557Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.099.1ArrayExpressCapper_1-4_B8_water---
8.999.0GSM128764Mittler_2-8_Zat12_Rep2_ATH1GSE5530Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.Link to GEO
8.999.0ArrayExpressE-MEXP-637-raw-cel-913039230---
8.899.0GSM133137S1500_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
8.899.0ArrayExpressE-MEXP-637-raw-cel-913039258---
8.899.0GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
8.799.0GSM157147Seedling_OETOP6A1_rep1GSE6812Gene expression in wild-type and transgenic plants overexpressing rice OsTOP6A1 geneLink to GEO
8.799.0ArrayExpressE-MEXP-1299-raw-cel-1519901394---
8.699.0GSM133128S0_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO



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