CoP: Co-expressed Biological Processes

Specifically-expressed experiments

Gene ID At1g76680

Gene name OPR1

Functional description Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.3 99.8 ArrayExpress E-MEXP-807-raw-cel-1173273223 - - -
32.1 99.7 ArrayExpress E-MEXP-807-raw-cel-1173273144 - - -
28.9 99.7 ArrayExpress E-MEXP-807-raw-cel-1173273252 - - -
26.9 99.7 GSM133968 Birnbaum_1-19_LRC-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
26.8 99.7 GSM133969 Birnbaum_1-20_LRC-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
25.9 99.7 ArrayExpress E-MEXP-1443-raw-cel-1581869745 - - -
25.4 99.6 ArrayExpress E-MEXP-807-raw-cel-1173273060 - - -
25.2 99.6 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
22.2 99.6 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
21.7 99.6 ArrayExpress E-MEXP-807-raw-cel-1173272832 - - -
21.5 99.6 ArrayExpress E-MEXP-807-raw-cel-1173273116 - - -
21.4 99.6 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
21.0 99.6 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
19.8 99.6 GSM270866 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
19.7 99.6 GSM184635 Arabidopsis, root cells, 140 mM NaCl, replicate 2 GSE7636 Expression analysis of the effect of protoplasting and FACS sorting in roots
19.7 99.6 ArrayExpress E-MEXP-807-raw-cel-1173273088 - - -
19.7 99.6 ArrayExpress E-MEXP-1443-raw-cel-1581869921 - - -
19.5 99.6 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
19.2 99.6 ArrayExpress E-MEXP-807-raw-cel-1173273032 - - -
18.9 99.5 GSM131321 AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
18.8 99.5 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
18.5 99.5 ArrayExpress E-MEXP-1443-raw-cel-1581869863 - - -
18.3 99.5 ArrayExpress E-MEXP-1443-raw-cel-1581869803 - - -
18.2 99.5 GSM184911 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
17.9 99.5 GSM184910 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
17.8 99.5 ArrayExpress E-MEXP-807-raw-cel-1173273170 - - -
17.6 99.5 ArrayExpress E-MEXP-807-raw-cel-1173272948 - - -
17.4 99.5 ArrayExpress E-MEXP-807-raw-cel-1173273196 - - -
17.0 99.5 GSM128760 Mittler_2-4_wildtype+H2O2_Rep1_ATH1 GSE5530 Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
17.0 99.5 GSM128768 Mittler_2-12_Zat12+H2O2_Rep3_ATH1 GSE5530 Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
16.8 99.5 GSM204069 protoplast_hypoxia_rep1 GSE8248 Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
16.5 99.5 GSM131325 AtGen_6-3521_Saltstress-Roots-12.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
15.9 99.5 ArrayExpress E-MEXP-1784-raw-cel-1661573018 - - -
15.8 99.5 GSM128766 Mittler_2-10_Zat12+H2O2_Rep1_ATH1 GSE5530 Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
15.4 99.5 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
15.4 99.5 ArrayExpress E-ATMX-28-raw-cel-1441104835 - - -
15.2 99.4 GSM291118 root - 21% oxygen - 48h - B GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.9 99.4 GSM184516 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
14.9 99.4 ArrayExpress E-MEXP-1784-raw-cel-1661573005 - - -
14.0 99.4 ArrayExpress Rente_1-1_WS2-HO_Rep1_ATH1 - - -
14.0 99.4 GSM184922 Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
13.9 99.4 GSM13782 Dexamethasone - replicate GSE911 Identification of LEAFY targets during reproductive transition
13.8 99.4 GSM75509 Col-0 2h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
13.7 99.4 GSM128761 Mittler_2-5_wildtype+H2O2_Rep2_ATH1 GSE5530 Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
13.6 99.4 ArrayExpress E-MEXP-1784-raw-cel-1661572992 - - -
13.6 99.4 GSM128762 Mittler_2-6_wildtype+H2O2_Rep3_ATH1 GSE5530 Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
13.5 99.4 ArrayExpress E-ATMX-28-raw-cel-1441104826 - - -
13.5 99.4 GSM184923 Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
13.3 99.4 ArrayExpress E-ATMX-28-raw-cel-1441104844 - - -
12.9 99.3 GSM290827 root - 04% oxygen - 48h - B GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.9 99.3 GSM184917 Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
12.4 99.3 GSM184916 Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
12.4 99.3 GSM184899 Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
12.3 99.3 GSM128767 Mittler_2-11_Zat12+H2O2_Rep2_ATH1 GSE5530 Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
12.2 99.3 ArrayExpress E-MEXP-1797-raw-cel-1669768084 - - -
12.2 99.3 GSM291128 root - 08% oxygen - 48h - B GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.9 99.3 GSM13778 Dexamethasone GSE911 Identification of LEAFY targets during reproductive transition
11.8 99.3 GSM272991 flu over-tAPX 14-2, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
11.5 99.3 GSM184908 Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
11.5 99.3 GSM133958 Fukuda_1-3_2A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.4 99.3 GSM205156 protoplast_controlDNA_rep1 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
11.3 99.3 GSM205159 protoplast_KIN10_rep1 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
11.3 99.3 ArrayExpress E-ATMX-13-raw-cel-1556149871 - - -
11.1 99.2 GSM266667 Arabidopsis, root cells, columella root cap, -Fe, replicate 2 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.9 99.2 GSM184898 Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
10.9 99.2 GSM13785 Mock - replicate GSE911 Identification of LEAFY targets during reproductive transition
10.9 99.2 GSM265414 Arabidopsis, root cells, -Fe, replicate 1 GSE10496 Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
10.7 99.2 GSM75520 slr-1 2h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
10.6 99.2 GSM75513 Col-0 2h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
10.5 99.2 GSM131146 AtGen_B-32_3-4-1_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.5 99.2 ArrayExpress E-MEXP-807-raw-cel-1173273005 - - -
10.4 99.2 ArrayExpress E-MEXP-449-raw-cel-676423306 - - -
10.4 99.2 GSM291023 root - 08% oxygen - 30min - G GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.4 99.2 GSM133973 Birnbaum_1-3_src5-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
10.3 99.2 GSM290756 root - 01% oxygen - 30min - D GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.3 99.2 GSM184892 Arabidopsis, root cells, columella root cap, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
10.3 99.2 GSM184634 Arabidopsis, root cells, 140 mM NaCl, replicate 1 GSE7636 Expression analysis of the effect of protoplasting and FACS sorting in roots
10.3 99.2 GSM133970 Birnbaum_1-21_LRC-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
10.3 99.2 GSM291114 root - 21% oxygen - 30min - G GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.3 99.2 GSM133991 Birnbaum_1-24_gl2-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
10.0 99.2 GSM266665 Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.0 99.2 ArrayExpress E-MEXP-1797-raw-cel-1669767967 - - -
10.0 99.2 GSM133988 Birnbaum_1-18_wol-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
9.9 99.1 GSM142852 MG001_ATH1_A5-Torres-2N3 GSE6176 Impact of Type III effectors on plant defense responses
9.9 99.1 GSM133989 Birnbaum_1-22_gl2-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
9.9 99.1 GSM184918 Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
9.9 99.1 GSM184919 Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
9.8 99.1 ArrayExpress E-MEXP-1443-raw-cel-1581869632 - - -
9.7 99.1 GSM133960 Fukuda_1-5_4A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.6 99.1 GSM266666 Arabidopsis, root cells, columella root cap, -Fe, replicate 1 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.5 99.1 GSM184837 Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7 GSE7639 Expression analysis of root developmental zones after treatment with salt
9.5 99.1 GSM25870 B Treated - 1 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
9.5 99.1 GSM131317 AtGen_6-3321_Saltstress-Roots-3.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
9.5 99.1 GSM184907 Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
9.4 99.1 GSM133967 Fukuda_1-12_10B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.4 99.1 GSM290762 root - 04% oxygen - 30min - D GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.3 99.1 GSM205160 protoplast_controlDNA_rep2 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
9.3 99.1 GSM142837 MG001_ATH1_A16-Torres-6N1 GSE6176 Impact of Type III effectors on plant defense responses
9.3 99.1 GSM266668 Arabidopsis, root cells, columella root cap, -Fe, replicate 3 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.2 99.1 GSM131119 AtGen_B-5_1-5-1_REP_1_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.2 99.1 ArrayExpress E-MEXP-791-raw-cel-1122937578 - - -
9.1 99.1 GSM131118 AtGen_B-4_1-4-1_REP_1_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.1 99.1 GSM184920 Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
9.0 99.1 GSM131132 AtGen_B-18_2-4-1_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.0 99.1 GSM133965 Fukuda_1-10_8B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.0 99.1 GSM75518 slr-1 6h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
9.0 99.1 GSM184520 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
8.9 99.0 GSM184517 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
8.8 99.0 GSM142838 MG001_ATH1_A17-Torres-6N3 GSE6176 Impact of Type III effectors on plant defense responses
8.8 99.0 GSM291099 root - 21% oxygen - 2h - D GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
8.8 99.0 GSM184912 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
8.8 99.0 ArrayExpress E-MEXP-807-raw-cel-1173272921 - - -
8.8 99.0 GSM184900 Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
8.8 99.0 ArrayExpress E-MEXP-1797-raw-cel-1669768030 - - -
8.7 99.0 GSM184838 Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8 GSE7639 Expression analysis of root developmental zones after treatment with salt
8.6 99.0 GSM133962 Fukuda_1-7_6A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
39.3	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273223	-	-	-
32.1	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
28.9	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
26.9	99.7	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
26.8	99.7	GSM133969	Birnbaum_1-20_LRC-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
25.9	99.7	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
25.4	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
25.2	99.6	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
22.2	99.6	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
21.7	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173272832	-	-	-
21.5	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
21.4	99.6	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
21.0	99.6	GSM270870	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
19.8	99.6	GSM270866	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
19.7	99.6	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
19.7	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
19.7	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869921	-	-	-
19.5	99.6	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
19.2	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273032	-	-	-
18.9	99.5	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
18.8	99.5	GSM270868	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
18.5	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869863	-	-	-
18.3	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869803	-	-	-
18.2	99.5	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
17.9	99.5	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
17.8	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
17.6	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173272948	-	-	-
17.4	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273196	-	-	-
17.0	99.5	GSM128760	Mittler_2-4_wildtype+H2O2_Rep1_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
17.0	99.5	GSM128768	Mittler_2-12_Zat12+H2O2_Rep3_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
16.8	99.5	GSM204069	protoplast_hypoxia_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
16.5	99.5	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
15.9	99.5	ArrayExpress	E-MEXP-1784-raw-cel-1661573018	-	-	-
15.8	99.5	GSM128766	Mittler_2-10_Zat12+H2O2_Rep1_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
15.4	99.5	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
15.4	99.5	ArrayExpress	E-ATMX-28-raw-cel-1441104835	-	-	-
15.2	99.4	GSM291118	root - 21% oxygen - 48h - B	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.9	99.4	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.9	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661573005	-	-	-
14.0	99.4	ArrayExpress	Rente_1-1_WS2-HO_Rep1_ATH1	-	-	-
14.0	99.4	GSM184922	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
13.9	99.4	GSM13782	Dexamethasone - replicate	GSE911	Identification of LEAFY targets during reproductive transition
13.8	99.4	GSM75509	Col-0 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
13.7	99.4	GSM128761	Mittler_2-5_wildtype+H2O2_Rep2_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
13.6	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661572992	-	-	-
13.6	99.4	GSM128762	Mittler_2-6_wildtype+H2O2_Rep3_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
13.5	99.4	ArrayExpress	E-ATMX-28-raw-cel-1441104826	-	-	-
13.5	99.4	GSM184923	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
13.3	99.4	ArrayExpress	E-ATMX-28-raw-cel-1441104844	-	-	-
12.9	99.3	GSM290827	root - 04% oxygen - 48h - B	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.9	99.3	GSM184917	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.4	99.3	GSM184916	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
12.4	99.3	GSM184899	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.3	99.3	GSM128767	Mittler_2-11_Zat12+H2O2_Rep2_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
12.2	99.3	ArrayExpress	E-MEXP-1797-raw-cel-1669768084	-	-	-
12.2	99.3	GSM291128	root - 08% oxygen - 48h - B	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.9	99.3	GSM13778	Dexamethasone	GSE911	Identification of LEAFY targets during reproductive transition
11.8	99.3	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
11.5	99.3	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.5	99.3	GSM133958	Fukuda_1-3_2A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.4	99.3	GSM205156	protoplast_controlDNA_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
11.3	99.3	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
11.3	99.3	ArrayExpress	E-ATMX-13-raw-cel-1556149871	-	-	-
11.1	99.2	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.9	99.2	GSM184898	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
10.9	99.2	GSM13785	Mock - replicate	GSE911	Identification of LEAFY targets during reproductive transition
10.9	99.2	GSM265414	Arabidopsis, root cells, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
10.7	99.2	GSM75520	slr-1 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.6	99.2	GSM75513	Col-0 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.5	99.2	GSM131146	AtGen_B-32_3-4-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.5	99.2	ArrayExpress	E-MEXP-807-raw-cel-1173273005	-	-	-
10.4	99.2	ArrayExpress	E-MEXP-449-raw-cel-676423306	-	-	-
10.4	99.2	GSM291023	root - 08% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.4	99.2	GSM133973	Birnbaum_1-3_src5-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.3	99.2	GSM290756	root - 01% oxygen - 30min - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.3	99.2	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
10.3	99.2	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
10.3	99.2	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.3	99.2	GSM291114	root - 21% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.3	99.2	GSM133991	Birnbaum_1-24_gl2-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.0	99.2	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.0	99.2	ArrayExpress	E-MEXP-1797-raw-cel-1669767967	-	-	-
10.0	99.2	GSM133988	Birnbaum_1-18_wol-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.9	99.1	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
9.9	99.1	GSM133989	Birnbaum_1-22_gl2-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.9	99.1	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.9	99.1	GSM184919	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
9.8	99.1	ArrayExpress	E-MEXP-1443-raw-cel-1581869632	-	-	-
9.7	99.1	GSM133960	Fukuda_1-5_4A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.6	99.1	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.5	99.1	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.5	99.1	GSM25870	B Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
9.5	99.1	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.5	99.1	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
9.4	99.1	GSM133967	Fukuda_1-12_10B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.4	99.1	GSM290762	root - 04% oxygen - 30min - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.3	99.1	GSM205160	protoplast_controlDNA_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
9.3	99.1	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
9.3	99.1	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.2	99.1	GSM131119	AtGen_B-5_1-5-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.2	99.1	ArrayExpress	E-MEXP-791-raw-cel-1122937578	-	-	-
9.1	99.1	GSM131118	AtGen_B-4_1-4-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.1	99.1	GSM184920	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
9.0	99.1	GSM131132	AtGen_B-18_2-4-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.0	99.1	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.0	99.1	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.0	99.1	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.8	99.0	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
8.8	99.0	GSM291099	root - 21% oxygen - 2h - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
8.8	99.0	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
8.8	99.0	ArrayExpress	E-MEXP-807-raw-cel-1173272921	-	-	-
8.8	99.0	GSM184900	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
8.8	99.0	ArrayExpress	E-MEXP-1797-raw-cel-1669768030	-	-	-
8.7	99.0	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
8.6	99.0	GSM133962	Fukuda_1-7_6A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Back to the CoP portal site

Back to the KAGIANA project homepage

Gene ID	At1g76680
Gene name	OPR1
Functional description	Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.