Specifically-expressed experiments

Gene ID	At1g76040
Gene name	CPK29
Functional description	member of Calcium Dependent Protein Kinase

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
916.1	100.0	GSM184923	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
613.1	100.0	GSM184906	Arabidopsis, root cells, protophloem, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
428.3	100.0	GSM184904	Arabidopsis, root cells, protophloem, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
244.0	100.0	GSM184922	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
138.7	99.9	GSM184905	Arabidopsis, root cells, protophloem, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
123.6	99.9	GSM184924	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
34.9	99.7	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
28.1	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
24.8	99.6	GSM27366	lec1-1 Stem	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
24.0	99.6	GSM131342	AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
22.6	99.6	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
19.5	99.6	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
18.7	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
18.2	99.5	GSM184919	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
17.9	99.5	GSM311281	Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
17.0	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467330	-	-	-
16.5	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
16.3	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273223	-	-	-
15.6	99.5	GSM184920	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
15.6	99.5	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
15.5	99.5	GSM244448	Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
14.9	99.4	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
14.7	99.4	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.7	99.4	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
13.7	99.4	GSM131341	AtGen_6-4221_Droughtstress-Roots-1.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
13.6	99.4	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
13.4	99.4	GSM142653	MC002_ATH1_A11.1-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.2	99.4	GSM142655	MC002_ATH1_A11.3-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.2	99.4	GSM131660	ATGE_28_C2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.1	99.4	GSM131658	ATGE_28_A2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
12.9	99.3	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.8	99.3	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.7	99.3	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.5	99.3	GSM134441	St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
12.4	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467339	-	-	-
12.3	99.3	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.3	99.3	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.1	99.3	GSM322550	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
11.7	99.3	GSM142654	MC002_ATH1_A11.2-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.5	99.3	ArrayExpress	E-MEXP-546-raw-cel-863289532	-	-	-
11.0	99.2	GSM131337	AtGen_6-4121_Droughtstress-Roots-0.5h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
11.0	99.2	GSM142637	MC002_ATH1_A5.3-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.0	99.2	GSM142636	MC002_ATH1_A5.2-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.8	99.2	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
10.5	99.2	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.4	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
10.3	99.2	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
10.2	99.2	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
10.1	99.2	GSM131659	ATGE_28_B2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.8	99.1	ArrayExpress	E-MEXP-807-raw-cel-1173273196	-	-	-
9.7	99.1	ArrayExpress	E-ATMX-25-raw-cel-1441077500	-	-	-
9.7	99.1	GSM142656	MC002_ATH1_A12.1-dubos-arh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.4	99.1	GSM131338	AtGen_6-4122_Droughtstress-Roots-0.5h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.4	99.1	GSM134385	St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.4	99.1	GSM264762	Tween 0.1% 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
9.2	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
9.0	99.1	GSM27362	WT Stem	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
8.9	99.0	ArrayExpress	E-ATMX-25-raw-cel-1441077482	-	-	-
8.8	99.0	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
8.8	99.0	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est

Back to the CoP portal site

Back to the KAGIANA project homepage