Specifically-expressed experiments

Gene ID At1g74710
Gene name isochorismate synthase 1 (ICS1) / isochorismate mutase
Functional description Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
520.3100.0ArrayExpressE-MEXP-807-raw-cel-1173273252---
244.0100.0ArrayExpressE-MEXP-807-raw-cel-1173273144---
170.1100.0GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
146.899.9GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
120.699.9ArrayExpressE-MEXP-546-raw-cel-863289586---
111.699.9GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
109.599.9GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
101.399.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
85.899.9GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
77.999.9GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
76.399.9ArrayExpressE-MEXP-807-raw-cel-1173273170---
69.199.9ArrayExpressE-MEXP-807-raw-cel-1173273032---
63.499.8ArrayExpressE-MEXP-546-raw-cel-863289424---
58.399.8ArrayExpressE-MEXP-739-raw-cel-1099467384---
55.699.8GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
55.699.8ArrayExpressE-MEXP-739-raw-cel-1099467393---
49.999.8ArrayExpressE-MEXP-546-raw-cel-863289532---
49.699.8GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
45.799.8ArrayExpressE-MEXP-739-raw-cel-1099467321---
44.199.8ArrayExpressE-MEXP-546-raw-cel-863289476---
43.199.8GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
41.599.8GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
35.699.7GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
31.899.7GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
31.399.7ArrayExpressE-MEXP-739-raw-cel-1099467330---
30.399.7ArrayExpressE-MEXP-807-raw-cel-1173272921---
30.199.7GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
28.999.7ArrayExpressE-MEXP-739-raw-cel-1099467303---
28.399.7GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
28.199.7ArrayExpressE-MEXP-739-raw-cel-1099467339---
27.399.7ArrayExpressE-MEXP-739-raw-cel-1099467375---
25.799.7ArrayExpressE-MEXP-807-raw-cel-1173273060---
25.599.7GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
24.399.6GSM264762Tween 0.1% 2hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
22.899.6GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
22.699.6ArrayExpressE-NASC-76-raw-cel-1359878900---
22.199.6GSM244453Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
21.099.6ArrayExpressE-MEXP-807-raw-cel-1173273116---
20.299.6GSM250966mil4 with BTH treatment, biological rep3GSE9955MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense responseLink to GEO
19.899.6GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
18.399.5ArrayExpressE-MEXP-807-raw-cel-1173273223---
18.399.5GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.899.5GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.799.5GSM1330372508GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
16.999.5GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.799.5ArrayExpressE-MEXP-173-raw-cel-357965452---
16.299.5GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
15.699.5GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.299.4GSM1330482790GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
15.099.4GSM244447Arabidopsis wild-type_2-4 h_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
14.799.4GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.699.4ArrayExpressE-MEXP-807-raw-cel-1173273196---
14.399.4ArrayExpressE-MEXP-739-raw-cel-1099467312---
13.899.4GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.699.4GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
13.299.4ArrayExpressE-MEXP-739-raw-cel-1099467240---
13.299.4ArrayExpressE-MEXP-1454-raw-cel-1585857925---
13.299.4GSM272988flu, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
12.999.3ArrayExpressE-MEXP-546-raw-cel-863289404---
12.699.3ArrayExpressE-MEXP-1454-raw-cel-1585857961---
12.599.3GSM128648Underwood_1-1_Cor-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.499.3GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.299.3ArrayExpressE-MEXP-739-raw-cel-1099467285---
12.099.3GSM264765paraquat 20mM 2hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
11.499.3GSM131065Hammond_2-6_pho1mutant_Rep3_ATH1GSE5611Differential gene expression patterns in the phosphate deficient mutant, pho 1Link to GEO
11.399.3ArrayExpressE-MEXP-807-raw-cel-1173272977---
11.299.2GSM133902Yang_1-7_CPR5NPR1-1_Rep1_ATH1GSE5745Mutant arrayLink to GEO
11.199.2ArrayExpressE-MEXP-739-raw-cel-1099467258---
11.099.2GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
10.999.2GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
10.799.2GSM1330462788GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.699.2ArrayExpressE-MEXP-739-raw-cel-1099467267---
10.599.2ArrayExpressE-MEXP-174-raw-cel-357966600---
10.299.2GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.099.2ArrayExpressE-MEXP-739-raw-cel-1099467249---
10.099.2GSM264761Tween 0.1% 1hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
9.999.1GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
9.899.1GSM250949mil4 overexpression line with BTH treatment, biological rep2GSE9956Expression profiling of the overexpression of MILDEW-INDUCED LESIONS 4Link to GEO
9.699.1GSM250964mil4 with BTH treatment, biological rep1GSE9955MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense responseLink to GEO
9.699.1GSM269497mkk1/mkk2, 24h after BTH, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
9.599.1ArrayExpressE-MEXP-739-raw-cel-1099467276---
9.499.1GSM133705Short_1-1_ozone_Rep1_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
9.499.1GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.299.1GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
9.099.1ArrayExpressE-ATMX-34-raw-cel-1563627275---
8.999.0GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
8.699.0ArrayExpressE-MEXP-432-raw-cel-590864409---



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