Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
401.0 | 100.0 | GSM134301 | Penfield_1-3_endosperm-control_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
288.0 | 100.0 | GSM134307 | Penfield_1-9_endosperm-PAC_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
248.3 | 100.0 | GSM134300 | Penfield_1-2_endosperm-control_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
227.4 | 100.0 | GSM134306 | Penfield_1-8_endosperm-PAC_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
199.1 | 100.0 | GSM134299 | Penfield_1-1_endosperm-control_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
157.3 | 99.9 | GSM134305 | Penfield_1-7_endosperm-PAC_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
72.3 | 99.9 | GSM109112 | vte1-1(Col-0) 1 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
71.0 | 99.9 | GSM134304 | Penfield_1-6_endosperm-ABA_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
61.7 | 99.8 | GSM109109 | wild-type(Col-0) 1 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
61.5 | 99.8 | GSM109111 | vte1-1(Col-0) 1 day, biological rep2 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
61.0 | 99.8 | GSM109115 | vte2-1(Col-0) 1 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
60.3 | 99.8 | GSM134303 | Penfield_1-5_endosperm-ABA_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
54.3 | 99.8 | GSM109114 | vte2-1(Col-0) 1 day, biological rep2 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
53.2 | 99.8 | GSM109110 | vte1-1(Col-0) 1 day, biological rep1 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
45.3 | 99.8 | GSM109108 | wild-type(Col-0) 1 day, biological rep2 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
45.3 | 99.8 | ArrayExpress | E-MEXP-1607-raw-cel-1620685818 | - | - | - |
40.8 | 99.8 | GSM134302 | Penfield_1-4_endosperm-ABA_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
40.1 | 99.8 | GSM282694 | arf2_mock_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
39.9 | 99.8 | GSM109113 | vte2-1(Col-0) 1 day, biological rep1 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
39.5 | 99.8 | GSM282696 | arf2_mock_rep3 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
36.8 | 99.7 | ArrayExpress | E-MEXP-475-raw-cel-680982458 | - | - | - |
34.3 | 99.7 | ArrayExpress | Rente_1-1_WS2-HO_Rep1_ATH1 | - | - | - |
34.3 | 99.7 | ArrayExpress | E-MEXP-1468-raw-cel-1591138919 | - | - | - |
34.2 | 99.7 | ArrayExpress | E-MEXP-1468-raw-cel-1591138820 | - | - | - |
33.3 | 99.7 | ArrayExpress | E-MEXP-1607-raw-cel-1620685834 | - | - | - |
32.2 | 99.7 | GSM109107 | wild-type(Col-0) 1 day, biological rep1 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
31.1 | 99.7 | GSM265432 | Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment |  |
31.0 | 99.7 | GSM134308 | Penfield_1-10_embryo-control_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
30.6 | 99.7 | GSM282695 | arf2_mock_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
30.6 | 99.7 | GSM299327 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
28.0 | 99.7 | ArrayExpress | E-MEXP-1607-raw-cel-1620685826 | - | - | - |
27.4 | 99.7 | GSM134513 | Col-0_4day_dark_-lincomycin_rep1 | GSE5759 | red illumination w/o lincomycin |  |
26.8 | 99.7 | GSM173621 | Col-0 rep1 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
26.6 | 99.7 | GSM173651 | mARF10 rep3 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
25.2 | 99.6 | GSM299337 | Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
25.0 | 99.6 | GSM173649 | mARF10 rep2 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
24.9 | 99.6 | GSM299341 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
24.8 | 99.6 | GSM245918 | wild type dark replicate 3 | GSE9728 | COP9 signalosome (csn) mutant analysis |  |
24.4 | 99.6 | GSM299331 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
24.1 | 99.6 | GSM173648 | mARF10 rep1 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
24.1 | 99.6 | ArrayExpress | E-MEXP-1468-raw-cel-1591138787 | - | - | - |
23.9 | 99.6 | GSM226270 | phyAphyB_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
23.6 | 99.6 | GSM245916 | wild type dark replicate 1 | GSE9728 | COP9 signalosome (csn) mutant analysis |  |
23.2 | 99.6 | GSM173624 | Col-0 rep3 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
22.7 | 99.6 | GSM134309 | Penfield_1-11_embryo-control_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
22.3 | 99.6 | GSM75519 | slr-1 0h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
22.2 | 99.6 | ArrayExpress | E-MEXP-1468-raw-cel-1591138688 | - | - | - |
22.0 | 99.6 | GSM245917 | wild type dark replicate 2 | GSE9728 | COP9 signalosome (csn) mutant analysis |  |
21.8 | 99.6 | GSM184930 | Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |
21.6 | 99.6 | ArrayExpress | E-MEXP-1468-raw-cel-1591138952 | - | - | - |
21.5 | 99.6 | GSM299339 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
21.4 | 99.6 | ArrayExpress | E-MEXP-1468-raw-cel-1591138655 | - | - | - |
21.3 | 99.6 | GSM299323 | Wild Type Germinating Seeds With Solvent Treatment Only Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
20.7 | 99.6 | GSM282702 | Col_mock_rep3 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
20.6 | 99.6 | GSM282700 | Col_mock_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
20.4 | 99.6 | GSM299338 | Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
20.1 | 99.6 | GSM173629 | ARF10 rep3 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
19.9 | 99.6 | ArrayExpress | E-MEXP-475-raw-cel-680982359 | - | - | - |
19.8 | 99.6 | GSM299340 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
19.3 | 99.6 | ArrayExpress | E-MEXP-1468-raw-cel-1591138886 | - | - | - |
19.0 | 99.5 | GSM299329 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
18.5 | 99.5 | GSM226271 | phyAphyB_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
18.5 | 99.5 | GSM226267 | WT(Ler)_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
18.4 | 99.5 | GSM299333 | Wild Type Germinating Seeds With Uniconazole Treatment Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
18.1 | 99.5 | GSM75520 | slr-1 2h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
18.0 | 99.5 | GSM173623 | Col-0 rep2 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
17.9 | 99.5 | GSM299330 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
17.8 | 99.5 | GSM299410 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
17.8 | 99.5 | GSM299408 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
17.0 | 99.5 | GSM299409 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
16.8 | 99.5 | GSM226272 | phyAphyB_Dark_replicate3 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
16.8 | 99.5 | GSM319208 | Dark-grown WT control (vector#1) | GSE12729 | Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings |  |
16.7 | 99.5 | ArrayExpress | E-MEXP-475-raw-cel-680982521 | - | - | - |
16.5 | 99.5 | GSM282703 | arf2_brz_2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
16.3 | 99.5 | ArrayExpress | Cornah_1-15_msc_Rep3_ATH1 | - | - | - |
16.2 | 99.5 | GSM134310 | Penfield_1-12_embryo-control_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
16.1 | 99.5 | GSM133306 | RIKEN-NAKABAYASHI2B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition |  |
15.9 | 99.5 | ArrayExpress | E-MEXP-475-raw-cel-680982395 | - | - | - |
15.9 | 99.5 | ArrayExpress | E-MEXP-1304-raw-cel-1530618171 | - | - | - |
15.9 | 99.5 | ArrayExpress | E-MEXP-475-raw-cel-680982413 | - | - | - |
15.4 | 99.5 | ArrayExpress | E-MEXP-1304-raw-cel-1530618136 | - | - | - |
15.3 | 99.4 | GSM109124 | vte2-1(Col-0) 3 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
15.2 | 99.4 | GSM299328 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
15.0 | 99.4 | GSM299325 | Wild Type Germinating Seeds With Solvent Treatment Only Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
14.9 | 99.4 | GSM173628 | ARF10 rep2 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
14.9 | 99.4 | ArrayExpress | E-MEXP-1784-raw-cel-1661573138 | - | - | - |
14.8 | 99.4 | GSM299335 | Wild Type Germinating Seeds With Uniconazole Treatment Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
14.8 | 99.4 | GSM75516 | slr-1 0h NAA replicate 1 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
14.7 | 99.4 | GSM265433 | Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment |  |
14.6 | 99.4 | ArrayExpress | E-MEXP-1784-raw-cel-1661573096 | - | - | - |
14.5 | 99.4 | GSM173626 | ARF10 rep1 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |  |
14.3 | 99.4 | ArrayExpress | E-MEXP-1607-raw-cel-1620685810 | - | - | - |
14.3 | 99.4 | ArrayExpress | E-MEXP-475-raw-cel-680982467 | - | - | - |
14.2 | 99.4 | GSM184929 | Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 1 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |
14.1 | 99.4 | ArrayExpress | E-MEXP-475-raw-cel-680982341 | - | - | - |
14.0 | 99.4 | ArrayExpress | E-MEXP-1468-raw-cel-1591138853 | - | - | - |
13.8 | 99.4 | ArrayExpress | Cornah_1-10_A2-irv_Rep3_ATH1 | - | - | - |
13.8 | 99.4 | GSM282701 | Col_mock_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
13.8 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618104 | - | - | - |
13.8 | 99.4 | GSM184927 | Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |
13.5 | 99.4 | GSM40554 | Polysomal mRNA, non-stress | GSE2218 | Changes in transcript abundance and association with large polysomes in response to hypoxia stress |  |
13.5 | 99.4 | GSM299321 | Wild Type Germinating Seeds With Solvent Treatment Only Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
13.4 | 99.4 | ArrayExpress | E-MEXP-1468-raw-cel-1591138721 | - | - | - |
13.3 | 99.4 | ArrayExpress | Cornah_1-14_msc_Rep2_ATH1 | - | - | - |
13.3 | 99.4 | GSM299326 | Wild Type Germinating Seeds With Solvent Treatment Only Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
13.2 | 99.4 | GSM299332 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
12.9 | 99.3 | GSM75521 | slr-1 6h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
12.9 | 99.3 | ArrayExpress | E-MEXP-475-raw-cel-680982323 | - | - | - |
12.9 | 99.3 | GSM226268 | WT(Ler)_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
12.6 | 99.3 | GSM226281 | YHB_Rc50_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
12.5 | 99.3 | GSM134520 | Col-0_4day_red illumination _+lincomycin_rep2 | GSE5759 | red illumination w/o lincomycin |  |
12.4 | 99.3 | ArrayExpress | Cornah_1-17_wtc_Rep2_ATH1 | - | - | - |
12.3 | 99.3 | ArrayExpress | E-MEXP-1304-raw-cel-1530618275 | - | - | - |
12.0 | 99.3 | ArrayExpress | E-MEXP-475-raw-cel-680982386 | - | - | - |
11.9 | 99.3 | ArrayExpress | E-MEXP-1607-raw-cel-1620685778 | - | - | - |
11.9 | 99.3 | GSM134514 | Col-0_4day_dark_-lincomycin_rep2 | GSE5759 | red illumination w/o lincomycin |  |
11.8 | 99.3 | ArrayExpress | E-MEXP-475-raw-cel-680982332 | - | - | - |
11.7 | 99.3 | GSM133305 | RIKEN-NAKABAYASHI2A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition |  |
11.6 | 99.3 | ArrayExpress | E-MEXP-1784-raw-cel-1661573117 | - | - | - |
11.6 | 99.3 | GSM299322 | Wild Type Germinating Seeds With Solvent Treatment Only Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
11.6 | 99.3 | GSM299336 | Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
11.5 | 99.3 | ArrayExpress | E-MEXP-1304-raw-cel-1530618235 | - | - | - |
11.5 | 99.3 | GSM75511 | Col-0 6h MOCK replicate 1 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation |  |
11.4 | 99.3 | ArrayExpress | E-MEXP-1299-raw-cel-1519902498 | - | - | - |
11.3 | 99.3 | ArrayExpress | E-MEXP-1607-raw-cel-1620685794 | - | - | - |
11.2 | 99.2 | ArrayExpress | Cornah_1-16_wtc_Rep1_ATH1 | - | - | - |
11.1 | 99.2 | ArrayExpress | E-MEXP-1468-raw-cel-1591138754 | - | - | - |
10.7 | 99.2 | GSM299324 | Wild Type Germinating Seeds With Solvent Treatment Only Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
10.7 | 99.2 | ArrayExpress | E-MEXP-1304-raw-cel-1530618068 | - | - | - |
10.6 | 99.2 | ArrayExpress | E-MEXP-1304-raw-cel-1530617935 | - | - | - |
10.4 | 99.2 | GSM184928 | Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 2 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |
10.3 | 99.2 | GSM133309 | RIKEN-NAKABAYASHI4B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition |  |
10.1 | 99.2 | GSM299334 | Wild Type Germinating Seeds With Uniconazole Treatment Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds |  |
10.0 | 99.2 | GSM134515 | Col-0_4day_dark_+lincomycin_rep1 | GSE5759 | red illumination w/o lincomycin |  |
9.9 | 99.1 | GSM142696 | MH001_ATH1_A10-grevi-AT1 | GSE6158 | Investigating the links between organic acid and carbohydrate regulation of gene expression. |  |
9.9 | 99.1 | ArrayExpress | E-MEXP-1607-raw-cel-1620685770 | - | - | - |
9.5 | 99.1 | ArrayExpress | E-MEXP-1607-raw-cel-1620685786 | - | - | - |
9.4 | 99.1 | ArrayExpress | E-MEXP-475-raw-cel-680982350 | - | - | - |
9.0 | 99.1 | GSM142698 | MH001_ATH1_A12-grevi-AT3 | GSE6158 | Investigating the links between organic acid and carbohydrate regulation of gene expression. |  |
8.9 | 99.0 | ArrayExpress | E-MEXP-1299-raw-cel-1519902994 | - | - | - |
8.9 | 99.0 | GSM292076 | Wt, dark sample, biological rep1 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
8.8 | 99.0 | GSM133310 | RIKEN-NAKABAYASHI5B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition |  |
8.7 | 99.0 | ArrayExpress | E-MEXP-475-raw-cel-680982485 | - | - | - |
8.6 | 99.0 | GSM184926 | Arabidopsis, whole roots, standard conditions, replicate 2 | GSE7642 | Time course expression analysis of the salt stress response in Arabidopsis roots |  |