Specifically-expressed experiments

Gene ID	At1g72970
Gene name	HTH (HOTHEAD)
Functional description	Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
79.4	99.9	GSM10446	WT 24-Hr Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
71.9	99.9	GSM10477	lec1-1 24-Hr Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
55.1	99.8	GSM10445	WT 24-Hr Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
37.9	99.8	GSM10478	lec1-1 24-Hr Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
37.5	99.7	GSM147966	lec1-1 Globular Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
31.0	99.7	GSM10442	WT Ovule 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
27.1	99.7	GSM147965	lec1-1 Globular Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
26.6	99.7	GSM131629	ATGE_57_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
25.2	99.6	GSM10441	WT Ovule 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
25.1	99.6	GSM131627	ATGE_57_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
21.7	99.6	GSM47053	rdr6-15 43	GSE2473	Small RNA biogenesis mutants
21.5	99.6	GSM242957	Mock day 3 (day3E1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
20.2	99.6	GSM131628	ATGE_57_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.9	99.6	GSM131631	ATGE_58_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.8	99.6	GSM131624	ATGE_56_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.7	99.6	GSM242954	Mock day 1 (day1E2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
19.5	99.6	GSM131579	ATGE_32_A2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.2	99.6	GSM131626	ATGE_56_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.1	99.6	GSM147964	WT Globular Stage Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
18.1	99.5	GSM62702	arf6 arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
18.0	99.5	GSM131625	ATGE_56_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.8	99.5	GSM147963	WT Globular Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
17.8	99.5	ArrayExpress	E-MEXP-849-raw-cel-1181980886	-	-	-
17.3	99.5	ArrayExpress	E-MEXP-849-raw-cel-1181980902	-	-	-
17.1	99.5	GSM131590	ATGE_35_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.0	99.5	GSM131588	ATGE_35_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.9	99.5	GSM131632	ATGE_58_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.7	99.5	GSM131580	ATGE_32_B2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.5	99.5	GSM131596	ATGE_37_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.1	99.5	GSM131581	ATGE_32_C2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.1	99.5	GSM131595	ATGE_37_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.0	99.5	GSM131594	ATGE_37_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.9	99.5	GSM131635	ATGE_59_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.9	99.5	GSM245251	4hr DEX Replicate 1	GSE9702	Identification of putative targets of AP3/PI
15.8	99.5	GSM242959	Steroid day 3 (day3D1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
15.7	99.5	GSM131589	ATGE_35_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.7	99.5	GSM242955	Steroid day 1 (day1D1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
15.3	99.4	GSM47050	Col-0 40	GSE2473	Small RNA biogenesis mutants
15.2	99.4	GSM131634	ATGE_59_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.2	99.4	GSM131633	ATGE_59_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.9	99.4	GSM128734	Hennig_1-6_siliques-CK_021114_3_B_Rep2_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
14.8	99.4	GSM131622	ATGE_55_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.8	99.4	ArrayExpress	E-MEXP-1246-raw-cel-1504120291	-	-	-
14.7	99.4	GSM131630	ATGE_58_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.6	99.4	GSM131621	ATGE_55_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.6	99.4	GSM47054	rdr6-15 44	GSE2473	Small RNA biogenesis mutants
14.3	99.4	GSM131623	ATGE_55_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.3	99.4	GSM131617	ATGE_53_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.2	99.4	ArrayExpress	E-MEXP-1246-raw-cel-1504120171	-	-	-
14.2	99.4	ArrayExpress	E-MEXP-849-raw-cel-1181980950	-	-	-
14.2	99.4	GSM232890	Wt.4-3.0	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
13.6	99.4	GSM131618	ATGE_54_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
13.3	99.4	ArrayExpress	E-MEXP-1246-raw-cel-1504120231	-	-	-
13.3	99.4	GSM47031	dcl3-121	GSE2473	Small RNA biogenesis mutants
13.1	99.4	GSM245237	0hr DEX Replicate 2	GSE9702	Identification of putative targets of AP3/PI
13.0	99.4	GSM131615	ATGE_53_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.8	99.3	ArrayExpress	E-MEXP-1246-raw-cel-1504120261	-	-	-
12.8	99.3	GSM131640	ATGE_92_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.7	99.3	GSM47034	hen1 24	GSE2473	Small RNA biogenesis mutants
12.6	99.3	GSM47041	hyl1 31	GSE2473	Small RNA biogenesis mutants
12.6	99.3	GSM242960	Steroid day 3 (day3D2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
12.6	99.3	GSM131620	ATGE_54_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.5	99.3	ArrayExpress	E-MEXP-1246-raw-cel-1504120201	-	-	-
12.5	99.3	GSM128731	Hennig_1-3_siliques-CK_021114_3_A_Rep1_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
12.4	99.3	GSM131577	ATGE_31_B2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.3	99.3	GSM47036	hen1 26	GSE2473	Small RNA biogenesis mutants
12.3	99.3	ArrayExpress	E-MEXP-1451-raw-cel-1585200202	-	-	-
12.2	99.3	GSM131583	ATGE_33_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.2	99.3	GSM242958	Mock day 3 (day3E2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
12.1	99.3	ArrayExpress	E-MEXP-849-raw-cel-1181980910	-	-	-
12.1	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121835915	-	-	-
12.1	99.3	GSM311284	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
12.0	99.3	ArrayExpress	E-TABM-63-raw-cel-681137087	-	-	-
12.0	99.3	GSM232881	Mut.1-5.90	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
12.0	99.3	GSM131578	ATGE_31_C2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.0	99.3	GSM131678	ATGE_50_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
12.0	99.3	GSM245236	0hr DEX Replicate 1	GSE9702	Identification of putative targets of AP3/PI
11.9	99.3	GSM47035	hen1 25	GSE2473	Small RNA biogenesis mutants
11.9	99.3	GSM131639	ATGE_92_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.8	99.3	ArrayExpress	E-TABM-63-raw-cel-681137160	-	-	-
11.7	99.3	ArrayExpress	E-MEXP-849-raw-cel-1181980966	-	-	-
11.7	99.3	ArrayExpress	E-MEXP-1451-raw-cel-1585200234	-	-	-
11.6	99.3	ArrayExpress	E-TABM-63-raw-cel-681137230	-	-	-
11.5	99.3	GSM232882	Mut.3-2.90	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
11.5	99.3	GSM318624	Apex_octa_18DAS_1	GSE12691	Knockdown and overexpression of CIN-TCP genes
11.4	99.3	GSM131614	ATGE_45_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.2	99.2	GSM131613	ATGE_45_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.2	99.2	ArrayExpress	E-MEXP-849-raw-cel-1181980934	-	-	-
11.2	99.2	GSM131612	ATGE_45_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.1	99.2	GSM47048	rdr2-1 38	GSE2473	Small RNA biogenesis mutants
11.1	99.2	GSM47037	hst-15 27	GSE2473	Small RNA biogenesis mutants
11.1	99.2	GSM131641	ATGE_92_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.9	99.2	GSM131576	ATGE_31_A2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.8	99.2	GSM131679	ATGE_51_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.8	99.2	ArrayExpress	E-MEXP-1246-raw-cel-1504120321	-	-	-
10.8	99.2	ArrayExpress	E-MEXP-1451-raw-cel-1585200170	-	-	-
10.7	99.2	GSM128732	Hennig_1-4_flower-buds-CK_021114_1_B_Rep2_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
10.7	99.2	GSM131676	ATGE_50_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.6	99.2	GSM131681	ATGE_51_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.6	99.2	GSM47051	Col-0 41	GSE2473	Small RNA biogenesis mutants
10.6	99.2	GSM47049	Col-0 39	GSE2473	Small RNA biogenesis mutants
10.6	99.2	GSM131584	ATGE_33_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.6	99.2	GSM131582	ATGE_33_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.3	99.2	GSM131616	ATGE_53_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.3	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526984	-	-	-
10.2	99.2	GSM131185	AtGen_D-18_2-FL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
10.2	99.2	ArrayExpress	E-MEXP-849-raw-cel-1181980926	-	-	-
10.1	99.2	ArrayExpress	E-TABM-63-raw-cel-681137264	-	-	-
10.0	99.2	GSM142597	BD001_ATH1_A1-DAVIE-CON	GSE6149	Targets of the mci genes.
10.0	99.2	GSM131661	ATGE_29_A2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.9	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836247	-	-	-
9.9	99.1	ArrayExpress	E-MEXP-849-raw-cel-1181980942	-	-	-
9.9	99.1	ArrayExpress	E-MEXP-849-raw-cel-1181980894	-	-	-
9.9	99.1	GSM142598	BD001_ATH1_A2-DAVIE-CON	GSE6149	Targets of the mci genes.
9.8	99.1	GSM131188	AtGen_D-21_2-BL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	GSM232889	Wt.3-1.0	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
9.7	99.1	GSM62690	arf6/arf6 ARF8/arf8 flowers_stage 1-14_untreated	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
9.7	99.1	GSM131677	ATGE_50_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.7	99.1	ArrayExpress	E-TABM-63-raw-cel-681137301	-	-	-
9.6	99.1	GSM131662	ATGE_29_B2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.6	99.1	ArrayExpress	E-TABM-63-raw-cel-681136686	-	-	-
9.5	99.1	GSM62694	Columbia flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
9.5	99.1	GSM245253	4hr DEX Replicate 3	GSE9702	Identification of putative targets of AP3/PI
9.4	99.1	ArrayExpress	E-MEXP-148-raw-cel-350528914	-	-	-
9.3	99.1	GSM47025	dcl1-7 15	GSE2473	Small RNA biogenesis mutants
9.2	99.1	ArrayExpress	E-TABM-63-raw-cel-681136648	-	-	-
9.2	99.1	GSM131191	AtGen_D-24_2-WL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.1	99.1	GSM62687	Columbia flowers_stage 1-14_untreated	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
9.0	99.1	GSM47042	hyl1 32	GSE2473	Small RNA biogenesis mutants
9.0	99.1	GSM62692	arf6 arf8 flowers_stage 1-14_untreated	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
9.0	99.1	GSM131173	AtGen_D-5_1-BL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.0	99.1	GSM245238	0hr DEX Replicate 3	GSE9702	Identification of putative targets of AP3/PI
8.9	99.0	GSM47040	hyl1 30	GSE2473	Small RNA biogenesis mutants
8.8	99.0	GSM232886	Wt.4-3.90	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
8.7	99.0	GSM131619	ATGE_54_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.7	99.0	GSM67078	Arabidopsis_Ovary01	GSE3056	Arabidopsis Pollination Study
8.7	99.0	GSM232884	Mut.3-2.240	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
8.7	99.0	GSM47012	Col-0 2	GSE2473	Small RNA biogenesis mutants

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