Specifically-expressed experiments

Gene ID At1g70170
Gene name MMP (MATRIX METALLOPROTEINASE)
Functional description mutant has Late flowering; Early senescence; Matrix Metalloproteinase

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
100.799.9ArrayExpressE-MEXP-791-raw-cel-1122937587---
93.599.9GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
71.799.9GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
60.299.8GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
57.199.8ArrayExpressE-MEXP-791-raw-cel-1122937623---
41.599.8GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
41.499.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
40.399.8GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
38.499.8GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.699.7GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
33.599.7GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
33.499.7ArrayExpressE-MEXP-1138-raw-cel-1432773258---
32.799.7GSM184492Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
32.399.7GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
29.399.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
28.499.7ArrayExpressE-MEXP-285-raw-cel-440782725---
28.099.7ArrayExpressE-MEXP-791-raw-cel-1122937605---
27.599.7GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
27.099.7GSM157305Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
26.699.7GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
26.499.7GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
26.399.7GSM157328Hammond_3-12_Caesium-treated-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
26.299.7GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
26.299.7ArrayExpressE-MEXP-828-raw-cel-1156922659---
26.099.7GSM157325Hammond_3-18_Caesium-treated-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
25.899.7GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
25.799.7GSM290759root - 01% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
25.399.6GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
25.099.6GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
24.599.6GSM154504Arabidopsis desiccated mature pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
23.999.6GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
23.899.6ArrayExpressE-MEXP-791-raw-cel-1122937614---
23.899.6GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
23.699.6ArrayExpressE-MEXP-828-raw-cel-1156922595---
23.399.6GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
22.399.6GSM291124root - 21% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
22.299.6ArrayExpressE-MEXP-285-raw-cel-440782791---
21.499.6GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
21.499.6GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
21.099.6ArrayExpressE-MEXP-1138-raw-cel-1432773290---
20.799.6GSM131337AtGen_6-4121_Droughtstress-Roots-0.5h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
20.799.6GSM131338AtGen_6-4122_Droughtstress-Roots-0.5h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
20.499.6GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
20.399.6GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
20.299.6GSM157324Hammond_3-17_Potassium-starved-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
20.299.6GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
19.899.6GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
19.899.6GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
19.799.6GSM131313AtGen_6-3221_Saltstress-Roots-1.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
19.399.6GSM157327Hammond_3-11_Potassium-starved-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
18.999.5GSM131397AtGen_6-7321_UV-Bstress-Roots-3.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
18.799.5GSM131385AtGen_6-7721_UV-Bstress-Roots-0.25h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
18.699.5GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
18.499.5ArrayExpressE-MEXP-1138-raw-cel-1432773322---
18.499.5GSM131294AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
17.799.5ArrayExpressE-MEXP-828-raw-cel-1156922342---
17.799.5GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.699.5GSM239254CaMV::DME stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
17.299.5GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
16.899.5GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.899.5GSM131389AtGen_6-7121_UV-Bstress-Roots-0.5h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
16.899.5GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
16.799.5GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
16.699.5GSM291114root - 21% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
16.599.5ArrayExpressE-MEXP-791-raw-cel-1122937578---
16.199.5GSM131398AtGen_6-7322_UV-Bstress-Roots-3.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
16.099.5GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
16.099.5ArrayExpressE-MEXP-828-raw-cel-1156922968---
15.899.5GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
15.499.5GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
15.299.4ArrayExpressE-MEXP-828-raw-cel-1156922634---
15.299.4GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
15.199.4GSM131410AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
15.199.4GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
15.099.4GSM291023root - 08% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
15.099.4GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesisLink to GEO
14.999.4GSM131369AtGen_6-5321_Genotoxicstress-Roots-3.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
14.799.4GSM131373AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
14.599.4GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
14.399.4GSM184505Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.399.4GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
14.399.4GSM131293AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
14.299.4GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
14.099.4GSM131390AtGen_6-7122_UV-Bstress-Roots-0.5h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
13.799.4GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
13.599.4GSM157307Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
13.599.4GSM39199Col_C1GSE2169rre1 and rre2 mutantsLink to GEO
13.299.4ArrayExpressE-MEXP-1138-raw-cel-1432773066---
13.099.4GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.899.3GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
12.699.3ArrayExpressE-MEXP-828-raw-cel-1156922438---
12.599.3ArrayExpressE-MEXP-791-raw-cel-1122937596---
12.499.3GSM184916Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.499.3GSM131401AtGen_6-7421_UV-Bstress-Roots-6.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
12.299.3GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
12.199.3GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
11.999.3GSM184482Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.799.3ArrayExpressE-MEXP-828-raw-cel-1156922296---
11.599.3GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.599.3GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.499.3GSM131370AtGen_6-5322_Genotoxicstress-Roots-3.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
11.399.3GSM131334AtGen_6-4722_Droughtstress-Roots-0.25h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
11.399.3GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
11.399.3GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
11.299.2GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.199.2GSM131314AtGen_6-3222_Saltstress-Roots-1.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
11.199.2GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.199.2GSM39192RRE1_C2GSE2169rre1 and rre2 mutantsLink to GEO
11.199.2GSM154506Arabidopsis hydrated pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
11.099.2ArrayExpressE-MEXP-828-raw-cel-1156922684---
11.099.2ArrayExpressE-MEXP-828-raw-cel-1156922416---
10.899.2GSM131409AtGen_6-7621_UV-Bstress-Roots-24.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
10.899.2GSM131289AtGen_6-2221_Osmoticstress-Roots-1.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
10.799.2GSM184559Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.699.2GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.699.2GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
10.599.2GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
10.399.2GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.399.2GSM157339Coates_1-11_Col-3_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.299.2GSM131430AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
10.299.2ArrayExpressE-MEXP-1138-raw-cel-1432773354---
10.299.2ArrayExpressE-MEXP-807-raw-cel-1173273252---
10.299.2GSM131386AtGen_6-7722_UV-Bstress-Roots-0.25h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
10.199.2GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
10.099.2GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
10.099.2GSM142786HO001_ATH1_A3-Okamo-WS-ABAGSE6171Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABALink to GEO
10.099.2ArrayExpressE-MEXP-1138-raw-cel-1432773162---
10.099.2GSM131310AtGen_6-3122_Saltstress-Roots-0.5h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.099.2GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.099.2GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.099.2GSM131374AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.999.1GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
9.999.1GSM39208RRE2_C2GSE2169rre1 and rre2 mutantsLink to GEO
9.899.1GSM291020root - 08% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.799.1GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.799.1GSM157309Gan_1-5_wildtype-nitrate-continuous(WNC)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
9.799.1GSM184487Epidermis&Cortex root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.799.1GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
9.799.1GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.699.1GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.699.1GSM291098root - 08% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.599.1GSM142670SF002_ATH1_A8-Fille-ANGR4-12+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
9.299.1GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.299.1GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.199.1GSM131349AtGen_6-4421_Droughtstress-Roots-6.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
9.199.1GSM237283Root Selenate rep 2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
9.199.1GSM218594Whole roots 3.5hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.199.1GSM131429AtGen_6-8423_Woundingstress-Roots-6.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
8.999.0GSM142671SF001_ATH1_A1-Fille-WT-nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
8.999.0GSM131290AtGen_6-2222_Osmoticstress-Roots-1.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
8.899.0GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
8.899.0GSM157338Coates_1-10_ara1OX_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
8.899.0GSM131402AtGen_6-7422_UV-Bstress-Roots-6.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
8.899.0GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
8.899.0GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO



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