Specifically-expressed experiments

Gene ID	At1g64590
Gene name	short-chain dehydrogenase/reductase (SDR) family protein
Functional description	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
260.4	100.0	ArrayExpress	E-MEXP-828-raw-cel-1156922684	-	-	-
201.2	100.0	ArrayExpress	E-MEXP-828-raw-cel-1156922634	-	-	-
197.9	100.0	ArrayExpress	E-MEXP-828-raw-cel-1156922659	-	-	-
187.3	100.0	ArrayExpress	E-MEXP-828-raw-cel-1156922438	-	-	-
186.8	100.0	ArrayExpress	E-MEXP-828-raw-cel-1156922553	-	-	-
168.2	100.0	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
147.4	99.9	ArrayExpress	E-MEXP-828-raw-cel-1156922905	-	-	-
117.1	99.9	ArrayExpress	E-MEXP-828-raw-cel-1156922809	-	-	-
108.9	99.9	ArrayExpress	E-MEXP-828-raw-cel-1156922386	-	-	-
89.0	99.9	ArrayExpress	E-MEXP-828-raw-cel-1156922416	-	-	-
75.1	99.9	ArrayExpress	E-MEXP-828-raw-cel-1156922595	-	-	-
61.5	99.8	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
59.5	99.8	GSM157307	Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
56.6	99.8	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
53.9	99.8	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
51.9	99.8	GSM157305	Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
49.4	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
48.5	99.8	GSM218596	Whole roots 3.5hr KNO3 treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
48.2	99.8	GSM157306	Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
47.8	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
43.6	99.8	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
42.9	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
42.2	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922342	-	-	-
39.2	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922613	-	-	-
36.9	99.7	GSM260882	Yap_A1-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
34.8	99.7	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
33.4	99.7	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
30.4	99.7	GSM260883	Yap_A2-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
29.7	99.7	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
29.7	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922318	-	-	-
29.4	99.7	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
29.2	99.7	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
27.5	99.7	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
26.2	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922368	-	-	-
25.9	99.7	GSM231200	chl1 at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
25.5	99.7	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
24.6	99.6	GSM131410	AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
24.0	99.6	GSM184539	Whole roots 2hr KCl control treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
23.7	99.6	GSM157332	Coates_1-4_ara1/2mut_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
23.2	99.6	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
21.2	99.6	GSM39202	Col_C4	GSE2169	rre1 and rre2 mutants
21.1	99.6	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
20.9	99.6	GSM39201	Col_C3	GSE2169	rre1 and rre2 mutants
20.7	99.6	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
20.4	99.6	GSM131409	AtGen_6-7621_UV-Bstress-Roots-24.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
20.2	99.6	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.1	99.6	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
20.1	99.6	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
19.4	99.6	GSM184561	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.3	99.6	GSM131570	ATGE_98_A	GSE5631	AtGenExpress: Developmental series (roots)
18.6	99.5	GSM131564	ATGE_94_A	GSE5631	AtGenExpress: Developmental series (roots)
18.3	99.5	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
18.3	99.5	GSM131566	ATGE_94_C	GSE5631	AtGenExpress: Developmental series (roots)
18.2	99.5	GSM131565	ATGE_94_B	GSE5631	AtGenExpress: Developmental series (roots)
17.9	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922968	-	-	-
17.9	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922572	-	-	-
17.2	99.5	GSM131571	ATGE_98_B	GSE5631	AtGenExpress: Developmental series (roots)
17.1	99.5	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
16.8	99.5	GSM75512	Col-0 0h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
16.1	99.5	GSM157328	Hammond_3-12_Caesium-treated-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
15.0	99.4	GSM39208	RRE2_C2	GSE2169	rre1 and rre2 mutants
14.9	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922872	-	-	-
14.8	99.4	GSM291023	root - 08% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.4	99.4	GSM39191	RRE1_C1	GSE2169	rre1 and rre2 mutants
14.3	99.4	GSM39199	Col_C1	GSE2169	rre1 and rre2 mutants
14.2	99.4	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
14.1	99.4	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
14.1	99.4	GSM133717	Urwin_A-1-Urwin-Con_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
13.7	99.4	GSM157325	Hammond_3-18_Caesium-treated-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.6	99.4	GSM131413	AtGen_6-8723_Woundingstress-Roots-0.25h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
13.5	99.4	GSM142624	MC002_ATH1_A1.2-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.4	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062243516	-	-	-
13.1	99.4	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
13.0	99.4	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
12.9	99.3	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
12.9	99.3	GSM291114	root - 21% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.8	99.3	GSM207293	Seedling_ConstantWhiteLight_52hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
12.3	99.3	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
12.3	99.3	GSM131313	AtGen_6-3221_Saltstress-Roots-1.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
12.3	99.3	GSM131385	AtGen_6-7721_UV-Bstress-Roots-0.25h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
12.1	99.3	GSM157336	Coates_1-8_ara1/2mut_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
12.1	99.3	GSM184506	Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.0	99.3	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.8	99.3	GSM157330	Coates_1-2_ara1OX_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
11.5	99.3	GSM133866	Cain_1-1_WT1_Rep1_ATH1	GSE5740	Polycomb Binding Protein
10.9	99.2	GSM131402	AtGen_6-7422_UV-Bstress-Roots-6.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
10.7	99.2	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
10.6	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922485	-	-	-
10.6	99.2	GSM131441	AtGen_6-9721_Heatstress-Roots-0.25h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
10.5	99.2	GSM218593	Whole roots 3.5hr KCl control treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.5	99.2	GSM142731	CH001_ATH1_A010-Hampt-akc	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
10.4	99.2	GSM265469	Arabidopsis, whole roots, -Fe, 24 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.4	99.2	GSM157329	Coates_1-1_Col-0_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.1	99.2	GSM133131	S1500_0H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.0	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922467	-	-	-
9.9	99.1	GSM207294	Seedling_ConstantWhiteLight_56hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
9.8	99.1	GSM131450	AtGen_6-9222_Heatstress-Roots-1.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
9.8	99.1	GSM131401	AtGen_6-7421_UV-Bstress-Roots-6.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.8	99.1	GSM265468	Arabidopsis, whole roots, -Fe, 12 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.7	99.1	GSM131393	AtGen_6-7221_UV-Bstress-Roots-1.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.7	99.1	GSM207297	Seedling_ConstantWhiteLight_68hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
9.6	99.1	GSM265470	Arabidopsis, whole roots, -Fe, 24 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.6	99.1	GSM133869	Cain_1-4_CDB1-Knockout_Rep2_ATH1	GSE5740	Polycomb Binding Protein
9.6	99.1	GSM131234	AtGen_6-0122_Control-Roots-0.5h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.4	99.1	GSM131373	AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
9.2	99.1	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.2	99.1	GSM131394	AtGen_6-7222_UV-Bstress-Roots-1.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.0	99.1	GSM207295	Seedling_ConstantWhiteLight_60hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
9.0	99.1	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
8.8	99.0	GSM133129	S0_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
8.7	99.0	ArrayExpress	E-MEXP-722-raw-cel-1062243470	-	-	-
8.6	99.0	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
8.6	99.0	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)

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