Specifically-expressed experiments

Gene ID	At1g61120
Gene name	TPS04 (TERPENE SYNTHASE 04)
Functional description	Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
306.7	100.0	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
296.9	100.0	GSM128720	Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
289.0	100.0	GSM133029	BC482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
266.4	100.0	GSM128677	Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
204.4	100.0	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
150.3	99.9	GSM133025	BC181-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
139.3	99.9	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
137.8	99.9	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
134.1	99.9	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
128.7	99.9	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
98.6	99.9	GSM142832	GM001_ATH1_A9-Torres-3N6_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
88.7	99.9	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
85.0	99.9	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
83.6	99.9	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
82.8	99.9	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
77.5	99.9	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
72.9	99.9	GSM152143	siz1-3 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
69.1	99.9	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
68.6	99.9	GSM157375	Truman_1-3_Pst-DC3000(avrRpm1)-4hpi_Rep1_ATH1	GSE6831	Systemic response to avirulent bacterial infection
68.0	99.9	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
65.8	99.8	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
63.4	99.8	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
62.7	99.8	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
56.2	99.8	GSM272992	flu over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
55.2	99.8	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
53.9	99.8	GSM131065	Hammond_2-6_pho1mutant_Rep3_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
52.6	99.8	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
50.5	99.8	GSM133707	Short_1-3_ozone_Rep2_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
50.2	99.8	GSM128654	Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
49.1	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
48.0	99.8	GSM275643	flu_2h	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
45.9	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
45.3	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
44.0	99.8	GSM131111	AtGen_B-39_3-4-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
43.6	99.8	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
42.6	99.8	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
42.1	99.8	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
39.7	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
39.7	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
37.8	99.8	GSM152139	Col-0 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
37.8	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
35.7	99.7	GSM272987	flu, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
33.5	99.7	ArrayExpress	E-MEXP-546-raw-cel-863289532	-	-	-
31.9	99.7	GSM205156	protoplast_controlDNA_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
30.8	99.7	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
29.6	99.7	GSM272988	flu, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
29.6	99.7	GSM131112	AtGen_B-40_3-5-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
28.2	99.7	GSM204026	protoplast_control_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
27.9	99.7	GSM131147	AtGen_B-33_3-5-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
25.6	99.7	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
25.4	99.6	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
24.6	99.6	GSM152135	Col-0 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
23.1	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
22.1	99.6	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
21.8	99.6	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
21.7	99.6	GSM152137	Col-0 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
21.1	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273223	-	-	-
20.7	99.6	GSM128655	Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
20.4	99.6	GSM133028	BC481-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
19.0	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
17.9	99.5	GSM131063	Hammond_2-4_pho1mutant_Rep2_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
17.3	99.5	GSM131140	AtGen_B-26_2-5-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
17.2	99.5	GSM271080	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
15.4	99.5	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
14.9	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002733	-	-	-
13.8	99.4	GSM131113	AtGen_B-41_3-6-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
13.8	99.4	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.5	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
12.7	99.3	ArrayExpress	E-ATMX-19-raw-cel-1375547496	-	-	-
12.6	99.3	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
11.7	99.3	GSM131146	AtGen_B-32_3-4-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.7	99.3	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
11.5	99.3	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.5	99.3	GSM142843	MG001_ATH1_A24-Torres-7N6	GSE6176	Impact of Type III effectors on plant defense responses
11.0	99.2	GSM133705	Short_1-1_ozone_Rep1_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
10.2	99.2	GSM131603	ATGE_41_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.7	99.1	GSM157381	Truman_1-9_Pst-DC3000(avrRpm1)-4hpi_Rep3_ATH1	GSE6831	Systemic response to avirulent bacterial infection
9.5	99.1	GSM133708	Short_1-5_ozone_Rep3_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
9.4	99.1	ArrayExpress	E-MEXP-807-raw-cel-1173273196	-	-	-
9.2	99.1	GSM142842	MG001_ATH1_A23-Torres-7N3	GSE6176	Impact of Type III effectors on plant defense responses
9.1	99.1	GSM131133	AtGen_B-19_2-5-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.0	99.1	ArrayExpress	E-MEXP-509-raw-cel-829148456	-	-	-
8.6	99.0	GSM157378	Truman_1-6_Pst-DC3000(avrRpm1)-4hpi_Rep2_ATH1	GSE6831	Systemic response to avirulent bacterial infection

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