Specifically-expressed experiments

Gene ID At1g56650
Gene name PAP1 (PRODUCTION OF ANTHOCYANIN PIGMENT 1)
Functional description Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
317.3100.0GSM339544Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -6GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
242.1100.0GSM339542Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -4GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
198.6100.0GSM339540Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -2GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
177.1100.0ArrayExpressE-ATMX-32-raw-cel-1562974527---
165.3100.0ArrayExpressE-MEXP-449-raw-cel-676423253---
140.699.9GSM339546Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -8GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
131.399.9GSM339548Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -10GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
125.499.9ArrayExpressE-MEXP-449-raw-cel-676423218---
107.499.9GSM269815T6 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
101.799.9ArrayExpressE-ATMX-32-raw-cel-1562974409---
89.199.9GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
84.899.9GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
78.899.9GSM269833T8 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
66.099.8GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
63.599.8GSM133736Buchanan-Wollaston_A-8-bwoll-Ei2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
62.599.8ArrayExpressE-TABM-209-raw-cel-1316546503---
58.599.8GSM151705gh3.5-1D 48 hpi, biological replicate 3GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
57.099.8GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
52.699.8GSM151703gh3.5-1D 48 hpi, biological replicate 1GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
52.099.8GSM268251WT-drought-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
51.399.8ArrayExpressE-ATMX-32-raw-cel-1562974621---
50.999.8GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
49.599.8GSM260955A2-LLOYD-PHO_REP2GSE10326Transcriptome analysis of pho3Link to GEO
49.499.8GSM151704gh3.5-1D 48 hpi, biological replicate 2GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
48.199.8GSM128718Pieterse_1-4_Control-72h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
46.199.8GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
45.199.8GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
44.899.8ArrayExpressE-TABM-209-raw-cel-1316546455---
44.699.8GSM268249dor-drought-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
42.899.8GSM269822T6 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
42.199.8GSM131539ATGE_25_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
40.699.8ArrayExpressE-ATMX-32-raw-cel-1562974681---
39.999.8ArrayExpressE-ATMX-32-raw-cel-1562974484---
39.199.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
38.499.8GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
37.699.7GSM131538ATGE_25_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
36.699.7ArrayExpressE-ATMX-32-raw-cel-1562974595---
35.899.7ArrayExpressE-TABM-209-raw-cel-1316546471---
33.599.7GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
32.199.7GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
31.899.7GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
31.699.7GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
31.299.7ArrayExpressE-ATMX-30-raw-cel-1513696830---
31.199.7GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
30.499.7ArrayExpressE-TABM-209-raw-cel-1316546519---
24.199.6GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
23.399.6GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.599.6GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
22.199.6ArrayExpressE-TABM-209-raw-cel-1316546487---
21.499.6GSM269824T8 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
21.499.6GSM133720Deeken_A-2-Deeke-Inf_SLD_REP1GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
20.799.6GSM128710Shirras_3-7_WildEcotype-low-soil-pH-12.5mM-CaCl2_Rep1_ATH1GSE5523Environmental Genomics of Calcicole-calcifuge physiologyLink to GEO
20.299.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
20.199.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.599.6ArrayExpressE-ATMX-19-raw-cel-1375547479---
18.499.5GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.799.5GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.799.5GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.199.5GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.099.5GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.899.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.399.5GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
16.299.5GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.099.5ArrayExpressE-ATMX-30-raw-cel-1513696930---
15.899.5GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
15.699.5GSM152137Col-0 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
15.599.5ArrayExpressE-TABM-209-raw-cel-1316546535---
14.899.4GSM269816T8 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
14.899.4GSM133722Deeken_A-2-Deeke-Inf_SLD_REP2GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
14.799.4GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.699.4ArrayExpressE-ATMX-32-raw-cel-1562974504---
14.699.4GSM133734Buchanan-Wollaston_A-6-bwoll-NG2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
14.699.4GSM260953A1-LLOYD-PHO_REP1GSE10326Transcriptome analysis of pho3Link to GEO
14.399.4GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
12.699.3ArrayExpressE-TABM-52-raw-cel-1583683438---
12.499.3ArrayExpressE-ATMX-30-raw-cel-1513696808---
12.299.3GSM7718612h pgm (Col-0) mutant replicate BGSE3424Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)Link to GEO
12.099.3ArrayExpressE-ATMX-30-raw-cel-1513696675---
11.599.3GSM187243Col_HL_BGSE7743Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High IrradianceLink to GEO
11.399.3GSM152135Col-0 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
11.299.2GSM133746Shirras_1-8_Non-Calcicole_Rep4_ATH1GSE5728Environmental Genomics of calcicole-calcifuge physiologyLink to GEO
10.899.2GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.899.2GSM133733Buchanan-Wollaston_A-5-bwoll-NG1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
10.599.2ArrayExpressE-MEXP-739-raw-cel-1099467357---
10.099.2GSM170940abh1 +ABA repl2GSE7112Abscisic acid effect on wild type and the abh1 mutantLink to GEO
9.999.1ArrayExpressE-MEXP-509-raw-cel-829148525---
9.599.1GSM152139Col-0 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.399.1GSM170897Col-0 +ABA repl1GSE7112Abscisic acid effect on wild type and the abh1 mutantLink to GEO
9.099.1ArrayExpressE-MEXP-509-raw-cel-829148597---
8.999.0GSM260956A3-LLOYD-PHO_REP3GSE10326Transcriptome analysis of pho3Link to GEO
8.999.0ArrayExpressE-TABM-21-raw-cel-529816362---
8.799.0ArrayExpressE-MEXP-546-raw-cel-863289641---



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