Specifically-expressed experiments

Gene ID At1g56430
Gene name NAS4 (NICOTIANAMINE SYNTHASE 4)
Functional description F:nicotianamine synthase activity;P:nicotianamine biosynthetic process;C:cellular_component unknown;PFABO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
104.999.9GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
103.299.9GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
81.899.9GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
76.599.9GSM133293NO.30GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
62.999.8GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
49.199.8GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
41.099.8GSM105206sta1_no treatement_Rep2GSE4662STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover and stress toleranceLink to GEO
35.499.7GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
33.899.7GSM131643ATGE_2_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
28.999.7GSM131645ATGE_2_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
27.999.7ArrayExpressE-ATMX-30-raw-cel-1513696731---
26.799.7GSM131644ATGE_2_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
24.699.6GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
23.399.6GSM133272RIKEN-GODA7B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
22.799.6GSM134448St.Clair_1-73_291_Mt-0_0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
22.499.6ArrayExpressE-MEXP-711-raw-cel-1563002663---
22.199.6ArrayExpressE-ATMX-24-raw-cel-1441078160---
21.699.6ArrayExpressE-MEXP-185-raw-cel-358912054---
20.799.6GSM258794pvip1 pvip2 seedling biological replicate 3GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
20.399.6GSM133260RIKEN-GODA1B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.999.6GSM133268RIKEN-GODA5B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.399.6GSM105205sta1_no treatement_Rep1GSE4662STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover and stress toleranceLink to GEO
19.099.5GSM133284RIKEN-GODA4B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
18.599.5GSM128745Edwards_3-1_FRI-FLC-wt1_Rep1_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
18.599.5GSM216888ga1-3_shoots_1h_water_repl1GSE8739Early gibberellin responses in ArabidopsisLink to GEO
18.399.5GSM133283RIKEN-GODA4A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
18.099.5GSM142697MH001_ATH1_A11-grevi-AT2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
17.399.5ArrayExpressE-MEXP-546-raw-cel-863289220---
17.299.5ArrayExpressE-ATMX-24-raw-cel-1441078181---
17.299.5GSM142696MH001_ATH1_A10-grevi-AT1GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
17.299.5GSM38669NSPSGSE2268Arabidopsis polysome microarrayLink to GEO
16.199.5ArrayExpressE-MEXP-1304-raw-cel-1530620145---
15.999.5ArrayExpressE-ATMX-24-raw-cel-1441078073---
15.799.5ArrayExpressE-MEXP-1304-raw-cel-1530620183---
15.799.5GSM133266RIKEN-GODA4B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
15.599.5GSM142694MH001_ATH1_A8-grevi-CT2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
15.499.5ArrayExpressE-MEXP-1304-raw-cel-1530620017---
15.499.5GSM131650ATGE_6_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
15.199.4GSM142693MH001_ATH1_A7-grevi-CT1GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
14.999.4GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
14.899.4GSM133292NO.29GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
14.899.4ArrayExpressE-MEXP-1304-raw-cel-1530620040---
14.699.4GSM133254RIKEN-GODA11B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
14.499.4GSM133276RIKEN-GODA9B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
14.499.4GSM133291NO.28GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
14.499.4GSM266676Arabidopsis, root cells, stele, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
14.099.4GSM133262RIKEN-GODA2B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
13.999.4GSM142698MH001_ATH1_A12-grevi-AT3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
13.899.4GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
13.899.4GSM142695MH001_ATH1_A9-grevi-CT3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
13.799.4ArrayExpressE-MEXP-1304-raw-cel-1530620116---
13.699.4ArrayExpressE-ATMX-24-raw-cel-1441078124---
13.199.4ArrayExpressE-ATMX-24-raw-cel-1441078106---
13.099.4GSM131649ATGE_6_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
13.099.4ArrayExpressE-MEXP-1304-raw-cel-1530619967---
12.899.3ArrayExpressE-MEXP-1304-raw-cel-1530619991---
12.799.3GSM317624Apex_14DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
12.699.3GSM260957A5-LLOYD-CON_REP2GSE10326Transcriptome analysis of pho3Link to GEO
12.699.3GSM131651ATGE_6_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
12.599.3GSM133270RIKEN-GODA6B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
12.499.3ArrayExpressE-ATMX-30-raw-cel-1513696778---
12.299.3ArrayExpressE-ATMX-24-raw-cel-1441078090---
12.199.3ArrayExpressE-MEXP-1304-raw-cel-1530618724---
12.199.3GSM258792pvip1 pvip2 seedling biological replicate 1GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
11.999.3ArrayExpressE-ATMX-24-raw-cel-1441078216---
11.999.3GSM131077Edwards_1-12_70hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
11.799.3ArrayExpressE-ATMX-30-raw-cel-1513696930---
11.799.3ArrayExpressE-ATMX-24-raw-cel-1441078321---
11.799.3GSM131071Edwards_1-6_46hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
11.399.3GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
11.299.2GSM216893ga1-3_shoots_1h_water_repl2GSE8739Early gibberellin responses in ArabidopsisLink to GEO
11.299.2GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
10.999.2GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.899.2ArrayExpressE-ATMX-24-raw-cel-1441078054---
10.899.2GSM128747Edwards_3-3_FRI-FLC-wt2_Rep2_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
10.899.2GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.899.2ArrayExpressE-ATMX-24-raw-cel-1441078143---
10.799.2GSM131078Edwards_1-13_74hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
10.599.2GSM18351935S:MYB28_like_miR_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
10.599.2GSM179977Arabidopsis ein2 mutant roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.499.2GSM107670C24-LUC_WT_no treatment_Rep5GSE4662STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover and stress toleranceLink to GEO
10.399.2GSM266675Arabidopsis, root cells, stele, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
10.399.2GSM142666NE001_ATH1_A4-Evans-m20GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
10.299.2GSM128746Edwards_3-2_fri-flc1_Rep1_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
10.299.2ArrayExpressE-MEXP-1304-raw-cel-1530620065---
10.199.2GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.199.2GSM133264RIKEN-GODA3B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.099.2GSM142639MC002_ATH1_A6.2-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.999.1ArrayExpressE-ATMX-24-raw-cel-1441078286---
9.899.1ArrayExpressE-MEXP-546-raw-cel-863289192---
9.799.1GSM133271RIKEN-GODA7A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.699.1GSM133923Weigel_2-15_CHIP-207-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
9.699.1ArrayExpressE-TABM-19-raw-cel-489757364---
9.599.1ArrayExpressE-ATMX-24-raw-cel-1441078302---
9.599.1ArrayExpressE-ATMX-24-raw-cel-1441078236---
9.599.1GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
9.399.1GSM216899ga1-3_shoots_1h_GA4_repl1GSE8739Early gibberellin responses in ArabidopsisLink to GEO
9.299.1ArrayExpressE-ATMX-24-raw-cel-1441078254---
9.199.1GSM131069Edwards_1-4_38hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
9.199.1ArrayExpressE-ATMX-24-raw-cel-1441078270---
9.199.1ArrayExpressE-MEXP-1799-raw-cel-1665601214---
9.199.1ArrayExpressE-TABM-19-raw-cel-489757606---
9.199.1GSM133909Weigel_2-1_CHIP-203-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
9.199.1ArrayExpressE-MEXP-682-raw-cel-922397560---
9.099.1GSM133269RIKEN-GODA6A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.099.1ArrayExpressE-MEXP-1799-raw-cel-1665601135---
8.999.0GSM133261RIKEN-GODA2A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
8.999.0GSM207292Seedling_ConstantWhiteLight_48hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
8.899.0ArrayExpressE-ATMX-24-raw-cel-1441078340---
8.899.0GSM128748Edwards_3-4_fri-flc2_Rep2_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
8.899.0ArrayExpressE-MEXP-1304-raw-cel-1530618685---
8.799.0GSM216901ga1-3_shoots_1h_GA4_repl2GSE8739Early gibberellin responses in ArabidopsisLink to GEO



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