Specifically-expressed experiments

Gene ID At1g55960
Gene name -
Functional description F:molecular_function unknown;P:biological_process unknown;C:unknown;MPO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
290.8100.0ArrayExpressE-ATMX-33-raw-cel-1562596264---
106.599.9ArrayExpressE-ATMX-33-raw-cel-1562596310---
74.799.9ArrayExpressE-ATMX-33-raw-cel-1562596288---
54.499.8ArrayExpressE-ATMX-19-raw-cel-1375547445---
53.499.8ArrayExpressE-ATMX-19-raw-cel-1375547411---
45.099.8ArrayExpressE-ATMX-19-raw-cel-1375547428---
37.999.8GSM131255AtGen_6-0611_Control-Shoots-24.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
37.999.8ArrayExpressE-MEXP-449-raw-cel-676423067---
36.999.7ArrayExpressE-ATMX-19-raw-cel-1375547394---
34.899.7GSM317519Apex_5DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
34.699.7ArrayExpressE-MEXP-1344-raw-cel-1559561683---
34.099.7GSM131467AtGen_6-9611_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
33.899.7ArrayExpressE-MEXP-449-raw-cel-676422954---
32.399.7GSM134779gun1-1_5day_-lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
31.699.7GSM197141wt_2 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
31.599.7GSM131435AtGen_6-8611_Woundingstress-Shoots-24.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
30.999.7GSM131468AtGen_6-9612_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
30.699.7GSM131256AtGen_6-0612_Control-Shoots-24.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
29.999.7GSM197143S14-150_2 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
29.299.7GSM197146S82-2_2 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
27.899.7ArrayExpressE-MEXP-1304-raw-cel-1530618514---
27.699.7GSM134772Col-0_5day_-lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
27.599.7ArrayExpressE-ATMX-19-raw-cel-1375547462---
27.399.7GSM131436AtGen_6-8612_Woundingstress-Shoots-24.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
26.899.7ArrayExpressE-MEXP-1304-raw-cel-1530618308---
26.599.7GSM142804SS001_ATH1_A7-Smith-10GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
26.299.7GSM142666NE001_ATH1_A4-Evans-m20GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
26.199.7GSM2531572h into an extended nightGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
25.999.7GSM318332ML_35DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
25.999.7GSM134774Col-0_5day_-lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
25.199.6GSM226275YHB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
24.999.6GSM197142aba3-1_2 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
24.899.6GSM142663NE001_ATH1_A1-Evans-w20GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
24.099.6GSM134782gun1-1_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
23.999.6GSM318345ML_35DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
23.899.6GSM142805SS001_ATH1_A8-Smith-11GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
23.599.6GSM297392At.StarchSD.WTSS3.WTR1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
23.599.6GSM197144S15-118_2 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
23.399.6GSM134783gun1-1_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
23.199.6GSM131263AtGen_6-1211_Cold(4°C)-Shoots-1.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
22.999.6GSM142886MW001_ATH1_A1-Wheel-a05GSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
22.799.6GSM297382At.StarchSD.WTSS3.SS3R1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
22.599.6GSM131219Scrase-Field_1-3_Col-0-wildtype_Rep2_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
22.599.6GSM318331EL_14DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
21.399.6GSM134780gun1-1_5day_-lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
21.099.6GSM94011S5 third repeatGSE4113Arabidopsis plants with altered levels of alternative oxidaseLink to GEO
20.899.6GSM131408AtGen_6-7612_UV-Bstress-Shoots-24.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
20.799.6GSM297387At.StarchSD.WTSS3.SS3R2L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
20.499.6GSM268246dor-ck-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
19.999.6GSM131331AtGen_6-4711_Droughtstress-Shoots-0.25h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
19.499.6ArrayExpressE-ATMX-19-raw-cel-1375547530---
19.099.5GSM131259AtGen_6-1111_Cold(4°C)-Shoots-0.5h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
19.099.5GSM7717804h low CO2 + light replicate BGSE3423Carbon fixation (endogenous sugar) and light-dependent gene expressionLink to GEO
18.699.5GSM131264AtGen_6-1212_Cold(4°C)-Shoots-1.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
18.699.5GSM131379AtGen_6-5611_Genotoxicstress-Shoots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
18.499.5GSM131224AtGen_6-0012_Control-Shoots-0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
18.299.5ArrayExpressE-MEXP-1454-raw-cel-1585858509---
18.099.5GSM226274YHB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
17.999.5GSM297397At.StarchSD.WTSS3.WTR2L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
17.899.5GSM183506WT_for_MYB29/76_rep3GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
17.899.5ArrayExpressE-MEXP-1304-raw-cel-1530619115---
17.699.5ArrayExpressEvans_2-4_fab1-mut-cold_ATH1---
17.699.5GSM131332AtGen_6-4712_Droughtstress-Shoots-0.25h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
17.499.5GSM94010Wild type third repeatGSE4113Arabidopsis plants with altered levels of alternative oxidaseLink to GEO
17.399.5GSM131217Scrase-Field_1-1_Col-0-wildtype_Rep1_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
17.399.5ArrayExpressEvans_2-8_35s-FAD3-cold_ATH1---
17.099.5GSM131407AtGen_6-7611_UV-Bstress-Shoots-24.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
16.899.5GSM7705600h Col-0 replicate BGSE3416Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leavesLink to GEO
16.799.5GSM131260AtGen_6-1112_Cold(4°C)-Shoots-0.5h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
16.799.5GSM7717504h low CO2 + light replicate AGSE3423Carbon fixation (endogenous sugar) and light-dependent gene expressionLink to GEO
16.699.5GSM226273YHB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
16.599.5ArrayExpressE-ATMX-19-raw-cel-1375547496---
16.499.5GSM131355AtGen_6-4611_Droughtstress-Shoots-24.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
16.499.5ArrayExpressE-MEXP-185-raw-cel-358911718---
16.299.5GSM268248WT-ck-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
15.899.5ArrayExpressE-MEXP-443-raw-cel-669122963---
15.799.5GSM142814SS002_ATH1_A6-smith-12hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
15.699.5GSM131356AtGen_6-4612_Droughtstress-Shoots-24.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
15.699.5ArrayExpressE-ATMX-35-raw-cel-1574334896---
15.399.4GSM131267AtGen_6-1311_Cold(4°C)-Shoots-3.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
15.299.4GSM134767abi4-102_5day_-lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
15.299.4GSM131384AtGen_6-7712_UV-Bstress-Shoots-0.25h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
14.999.4GSM197145S58-2_2 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
14.899.4GSM131387AtGen_6-7111_UV-Bstress-Shoots-0.5h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
14.899.4GSM131227AtGen_6-0711_Control-Shoots-0.25h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
14.799.4GSM237293Shoot control rep2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
14.699.4ArrayExpressE-MEXP-443-raw-cel-669122954---
14.499.4GSM134768abi4-102_5day_-lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
14.499.4GSM128776Eulgem_1-3_Col-0-MKK2-w.t.4_Rep1_AGGSE5532Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2Link to GEO
14.299.4GSM131268AtGen_6-1312_Cold(4°C)-Shoots-3.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
13.899.4GSM244456Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
13.799.4GSM317526Apex_5DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
13.099.4ArrayExpressE-MEXP-1454-raw-cel-1585858473---
13.099.4GSM142815SS002_ATH1_A7-smith-13hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
13.099.4GSM131340AtGen_6-4212_Droughtstress-Shoots-1.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.999.3GSM94009A1-1 third repeatGSE4113Arabidopsis plants with altered levels of alternative oxidaseLink to GEO
12.899.3GSM253155end of the night BGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
12.799.3GSM131388AtGen_6-7112_UV-Bstress-Shoots-0.5h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
12.799.3GSM142773AM002_ATH1_A8-MCCOR-GDBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
12.599.3GSM131440AtGen_6-9712_Heatstress-Shoots-0.25h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
12.599.3GSM272986WT Col, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
12.599.3ArrayExpressE-MEXP-1454-raw-cel-1585858145---
12.399.3ArrayExpressE-MEXP-185-raw-cel-358911606---
12.399.3GSM109121vte1-1(Col-0) 3 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
12.399.3GSM183504WT_for_MYB29/76_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
12.199.3GSM131335AtGen_6-4111_Droughtstress-Shoots-0.5h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.199.3GSM131383AtGen_6-7711_UV-Bstress-Shoots-0.25h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.999.3ArrayExpressE-MEXP-1454-raw-cel-1585858399---
11.799.3GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
11.799.3GSM128775Eulgem_1-1_Col-0-untreated_Rep1_AGGSE5532Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2Link to GEO
11.399.3ArrayExpressE-MEXP-1094-raw-cel-1379507113---
11.399.3GSM237294Shoot Selenate rep1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
11.399.3GSM7705700h Col-0 replicate CGSE3416Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leavesLink to GEO
11.299.2GSM131223AtGen_6-0011_Control-Shoots-0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
11.199.2ArrayExpressE-MEXP-185-raw-cel-358911774---
11.099.2ArrayExpressE-MEXP-1262-raw-cel-1502676360---
10.999.2GSM272985WT Col, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
10.899.2GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
10.799.2GSM133399Knight_2-1_wildtype-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
10.699.2ArrayExpressE-MEXP-1454-raw-cel-1585858181---
10.699.2GSM7705500h Col-0 replicate AGSE3416Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leavesLink to GEO
10.699.2GSM244445Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
10.599.2GSM151694Col-0 uninoculated, biological replicate 1GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
10.499.2ArrayExpressE-MEXP-185-raw-cel-358911662---
10.499.2GSM244458Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
10.499.2GSM272990over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
10.499.2GSM131439AtGen_6-9711_Heatstress-Shoots-0.25h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.199.2ArrayExpressE-MEXP-1304-raw-cel-1530618549---
10.199.2GSM131271AtGen_6-1411_Cold(4°C)-Shoots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
10.099.2ArrayExpressEvans_2-2_col-WT-cold_ATH1---
9.999.1GSM253156end of the night CGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
9.999.1ArrayExpressE-MEXP-443-raw-cel-669122945---
9.899.1GSM142770AM001_ATH1_axr4-2GSE6168Comparison of the transcript profile of the auxin resistant axr4 mutant and wild-type Col0Link to GEO
9.899.1GSM139895WT_non-polysome_rep1GSE6024eif3h/WT polysome loadingLink to GEO
9.899.1GSM244459Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
9.899.1GSM131380AtGen_6-5612_Genotoxicstress-Shoots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.899.1GSM151695Col-0 uninoculated, biological replicate 2GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
9.699.1GSM131231AtGen_6-0111_Control-Shoots-0.5h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.699.1ArrayExpressE-ATMX-19-raw-cel-1375547513---
9.699.1ArrayExpressE-MEXP-1094-raw-cel-1379507153---
9.599.1ArrayExpressE-MEXP-285-raw-cel-440782853---
9.599.1GSM272989over-tAPX 14-2, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
9.499.1ArrayExpressEvans_2-12_fab3-7-8-mut-aeq-cold_ATH1---
9.499.1ArrayExpressE-MEXP-1304-raw-cel-1530618339---
9.499.1ArrayExpressE-MEXP-285-raw-cel-440783035---
9.499.1ArrayExpressE-MEXP-285-raw-cel-440783091---
9.399.1ArrayExpressE-MEXP-443-raw-cel-669122918---
9.399.1ArrayExpressE-MEXP-185-raw-cel-358911830---
9.399.1GSM131307AtGen_6-3111_Saltstress-Shoots-0.5h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.299.1ArrayExpressE-MEXP-1454-raw-cel-1585858363---
9.099.1GSM109124vte2-1(Col-0) 3 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
9.099.1ArrayExpressE-MEXP-185-raw-cel-358912054---
8.999.0ArrayExpressE-MEXP-1262-raw-cel-1502676217---
8.999.0GSM244457Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
8.999.0ArrayExpressE-MEXP-1304-raw-cel-1530619702---
8.899.0GSM131228AtGen_6-0712_Control-Shoots-0.25h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
8.899.0GSM142777AM002_ATH1_A2-MCCOR-WDAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO



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