Specifically-expressed experiments

Gene ID	At1g55020
Gene name	LOX1
Functional description	lipoxygenase, a defense gene conferring resistance Xanthomonas campestris

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
99.2	99.9	GSM67087	Arabidopsis_Stigma03	GSE3056	Arabidopsis Pollination Study
74.2	99.9	GSM67086	Arabidopsis_Stigma02	GSE3056	Arabidopsis Pollination Study
54.5	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
43.1	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
39.6	99.8	GSM131377	AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
38.8	99.8	GSM131350	AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
37.4	99.7	GSM131305	AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
32.5	99.7	GSM109109	wild-type(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
31.7	99.7	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
30.8	99.7	GSM128730	Hennig_1-2_flowers-CK_021114_2_A_Rep1_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
29.8	99.7	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
28.8	99.7	GSM131349	AtGen_6-4421_Droughtstress-Roots-6.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
27.3	99.7	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
26.0	99.7	GSM131438	AtGen_6-8622_Woundingstress-Roots-24.0h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
25.9	99.7	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
24.8	99.6	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
24.6	99.6	GSM109115	vte2-1(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
24.4	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
22.6	99.6	GSM142672	SF001_ATH1_A2-Fille-WT-+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
22.6	99.6	GSM131306	AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
22.2	99.6	GSM142728	CH001_ATH1_A007-Hampt-c4b	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
21.9	99.6	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
21.1	99.6	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
20.7	99.6	ArrayExpress	E-MEXP-285-raw-cel-440783273	-	-	-
20.0	99.6	GSM142673	SF001_ATH1_A3-Fille-ANGR4-12	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
19.7	99.6	GSM131330	AtGen_6-3622_Saltstress-Roots-24.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
19.5	99.6	GSM67084	Arabidopsis_Stigma01	GSE3056	Arabidopsis Pollination Study
19.5	99.6	GSM131570	ATGE_98_A	GSE5631	AtGenExpress: Developmental series (roots)
19.4	99.6	GSM131329	AtGen_6-3621_Saltstress-Roots-24.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
19.0	99.5	GSM142671	SF001_ATH1_A1-Fille-WT-nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
18.8	99.5	GSM131354	AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
18.6	99.5	GSM142670	SF002_ATH1_A8-Fille-ANGR4-12+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
18.4	99.5	GSM299329	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
18.3	99.5	GSM131302	AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
18.3	99.5	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
18.2	99.5	GSM299327	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
18.1	99.5	GSM271080	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
18.0	99.5	GSM131301	AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
17.6	99.5	GSM131353	AtGen_6-4521_Droughtstress-Roots-12.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
17.4	99.5	GSM131571	ATGE_98_B	GSE5631	AtGenExpress: Developmental series (roots)
17.3	99.5	ArrayExpress	E-MEXP-285-raw-cel-440783335	-	-	-
17.3	99.5	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
17.3	99.5	GSM131326	AtGen_6-3522_Saltstress-Roots-12.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
16.7	99.5	GSM109113	vte2-1(Col-0) 1 day, biological rep1	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
16.5	99.5	GSM299333	Wild Type Germinating Seeds With Uniconazole Treatment Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
16.5	99.5	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
16.5	99.5	GSM299338	Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
16.3	99.5	GSM131297	AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
15.7	99.5	GSM299323	Wild Type Germinating Seeds With Solvent Treatment Only Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
15.6	99.5	GSM142674	SF002_ATH1_A5-Fille-WTnodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
15.6	99.5	GSM142884	CW001_ATH1_A1.3-WestC-kuu	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
15.5	99.5	GSM131382	AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
15.4	99.5	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
15.4	99.5	GSM133296	NO.33	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
15.3	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
15.0	99.4	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.8	99.4	GSM131374	AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
14.6	99.4	GSM271059	Arabidopsis plant (Col-0), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
14.5	99.4	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
14.4	99.4	GSM131298	AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
14.4	99.4	GSM142675	SF002_ATH1_A6-Fille-WT+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
14.2	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937596	-	-	-
13.9	99.4	GSM131381	AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
13.8	99.4	GSM153923	No ABA control rep2	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
13.7	99.4	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
13.6	99.4	GSM75515	Col-0 6h MOCK replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
13.6	99.4	GSM133294	NO.31	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
13.5	99.4	GSM131346	AtGen_6-4322_Droughtstress-Roots-3.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
13.5	99.4	GSM271072	Arabidopsis plant (tga2-5-6), 4h_response to phytoprostane A1_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
13.4	99.4	GSM299331	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
13.2	99.4	GSM128733	Hennig_1-5_flowers-CK_021114_2_B_Rep2_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
13.2	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937614	-	-	-
13.0	99.4	GSM142669	SF002_ATH1_A7-Fille-ANGR4-12nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
13.0	99.4	GSM299339	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
12.7	99.3	GSM299337	Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
12.5	99.3	GSM133717	Urwin_A-1-Urwin-Con_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
12.5	99.3	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
12.3	99.3	GSM133295	NO.32	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
12.3	99.3	GSM75511	Col-0 6h MOCK replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.8	99.3	GSM131434	AtGen_6-8525_Woundingstress-Roots-12.0h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
11.6	99.3	GSM142732	CH001_ATH1_A011-Hampt-c4c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.5	99.3	GSM131608	ATGE_42_D	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.4	99.3	GSM131373	AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
11.4	99.3	GSM299410	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
11.1	99.2	GSM142649	MC002_ATH1_A9.3-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.1	99.2	GSM131847	Pracharoenwattana_1-4_ColA_Rep1_ATH1	GSE5641	Peroxisomal mdh mutant
11.0	99.2	GSM109112	vte1-1(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
10.9	99.2	GSM299322	Wild Type Germinating Seeds With Solvent Treatment Only Set 2 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
10.9	99.2	GSM131597	ATGE_39_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.8	99.2	GSM131599	ATGE_39_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.7	99.2	GSM299330	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
10.6	99.2	GSM131378	AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
10.6	99.2	GSM131598	ATGE_39_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.6	99.2	GSM157338	Coates_1-10_ara1OX_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.6	99.2	GSM133718	Urwin_A-2-Urwin-Inf_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
10.5	99.2	ArrayExpress	Cornah_1-14_msc_Rep2_ATH1	-	-	-
10.3	99.2	GSM62700	arf6/arf6 ARF8/arf8 flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
10.2	99.2	GSM271058	Arabidopsis plant (Col-0), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
10.1	99.2	GSM109107	wild-type(Col-0) 1 day, biological rep1	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
10.0	99.2	GSM67078	Arabidopsis_Ovary01	GSE3056	Arabidopsis Pollination Study
10.0	99.2	GSM131613	ATGE_45_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.9	99.1	GSM142648	MC002_ATH1_A9.2-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.9	99.1	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.9	99.1	GSM109114	vte2-1(Col-0) 1 day, biological rep2	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
9.9	99.1	GSM299332	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.8	99.1	GSM131390	AtGen_6-7122_UV-Bstress-Roots-0.5h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.7	99.1	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.7	99.1	GSM131345	AtGen_6-4321_Droughtstress-Roots-3.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.7	99.1	GSM131430	AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
9.7	99.1	GSM299335	Wild Type Germinating Seeds With Uniconazole Treatment Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.6	99.1	GSM75519	slr-1 0h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.6	99.1	GSM184539	Whole roots 2hr KCl control treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.6	99.1	GSM142641	MC002_ATH1_A7.1-dubos-wLh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.5	99.1	GSM131357	AtGen_6-4621_Droughtstress-Roots-24.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.4	99.1	GSM131845	Pracharoenwattana_1-2_mdhB_Rep2_ATH1	GSE5641	Peroxisomal mdh mutant
9.4	99.1	GSM109108	wild-type(Col-0) 1 day, biological rep2	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
9.4	99.1	GSM142695	MH001_ATH1_A9-grevi-CT3	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
9.4	99.1	GSM131410	AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.4	99.1	GSM133957	Fukuda_1-2_0B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.3	99.1	ArrayExpress	Cornah_1-10_A2-irv_Rep3_ATH1	-	-	-
9.3	99.1	GSM131612	ATGE_45_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.3	99.1	GSM131429	AtGen_6-8423_Woundingstress-Roots-6.0h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
9.3	99.1	GSM299324	Wild Type Germinating Seeds With Solvent Treatment Only Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.2	99.1	GSM134301	Penfield_1-3_endosperm-control_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
9.2	99.1	GSM299321	Wild Type Germinating Seeds With Solvent Treatment Only Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.1	99.1	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.0	99.1	GSM131389	AtGen_6-7121_UV-Bstress-Roots-0.5h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.0	99.1	ArrayExpress	E-MEXP-1246-raw-cel-1504120201	-	-	-
9.0	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922809	-	-	-
9.0	99.1	GSM131606	ATGE_42_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.9	99.0	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
8.9	99.0	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
8.8	99.0	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
8.8	99.0	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
8.8	99.0	GSM131409	AtGen_6-7621_UV-Bstress-Roots-24.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
8.7	99.0	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
8.7	99.0	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
8.7	99.0	GSM142724	CH001_ATH1_A003-Hampt-c4a_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
8.6	99.0	GSM131848	Pracharoenwattana_1-5_ColB_Rep2_ATH1	GSE5641	Peroxisomal mdh mutant

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