Specifically-expressed experiments

Gene ID	At1g54890
Gene name	late embryogenesis abundant protein-related / LEA protein-related
Functional description	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
163.9	99.9	GSM252692	Section of Root from 270 mm to 340 mm harvested immediately rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
159.2	99.9	GSM252678	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
152.3	99.9	GSM252691	Section of Root from 270 mm to 340 mm harvested immediately rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
97.2	99.9	GSM226546	Slice4JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
97.1	99.9	GSM252676	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
94.7	99.9	GSM252675	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
93.5	99.9	GSM252690	Section of Root from 270 mm to 340 mm harvested immediately rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
85.2	99.9	GSM184833	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 3	GSE7639	Expression analysis of root developmental zones after treatment with salt
81.0	99.9	GSM252677	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
78.3	99.9	GSM226535	L5SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
74.7	99.9	GSM184834	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4	GSE7639	Expression analysis of root developmental zones after treatment with salt
73.4	99.9	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
70.6	99.9	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
61.3	99.8	GSM252672	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
56.4	99.8	GSM184836	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6	GSE7639	Expression analysis of root developmental zones after treatment with salt
53.9	99.8	GSM184484	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
50.1	99.8	GSM218590	Protoplasted root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
49.3	99.8	GSM226545	Slice3JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
47.9	99.8	GSM184478	Lateral Root Cap root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
44.5	99.8	GSM252674	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
44.4	99.8	GSM218292	At_Standard_cpctry-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
43.0	99.8	GSM252669	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
42.0	99.8	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
41.7	99.8	GSM252671	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
41.0	99.8	GSM184841	Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
40.3	99.8	GSM252681	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
39.1	99.8	GSM218284	At_Standard_Col-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
38.2	99.8	GSM131329	AtGen_6-3621_Saltstress-Roots-24.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
37.8	99.8	GSM265428	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
37.7	99.7	GSM218296	At_Standard_scm-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
37.5	99.7	GSM252682	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
33.9	99.7	GSM252680	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
33.6	99.7	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
30.6	99.7	GSM252673	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
30.6	99.7	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
30.3	99.7	GSM218588	Protoplasted root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
30.0	99.7	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
29.8	99.7	GSM184842	Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
29.7	99.7	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
27.3	99.7	GSM131462	AtGen_6-9422_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
25.4	99.6	GSM218288	At_Standard_wermyb23-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
24.9	99.6	GSM218291	At_Standard_cpctry-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
24.5	99.6	GSM252668	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
23.6	99.6	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
23.6	99.6	GSM128697	Heinekamp_1-6_control-root_Rep2_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
22.8	99.6	GSM131350	AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
22.8	99.6	GSM184832	Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
22.7	99.6	GSM131330	AtGen_6-3622_Saltstress-Roots-24.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
22.5	99.6	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
22.4	99.6	GSM218287	At_Standard_wermyb23-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
22.1	99.6	GSM252683	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep5	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
22.1	99.6	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
22.0	99.6	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
21.3	99.6	GSM131354	AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
21.0	99.6	GSM265421	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
20.0	99.6	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
19.5	99.6	GSM218283	At_Standard_Col-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
18.0	99.5	GSM184831	Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.5	99.5	GSM218295	At_Standard_scm-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
17.1	99.5	GSM218293	At_NaCl_cpctry-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
16.8	99.5	GSM252679	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
16.7	99.5	GSM128701	Heinekamp_1-10_control-root_Rep3_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
16.7	99.5	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
16.1	99.5	GSM226534	L4SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
15.9	99.5	GSM184935	Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
15.5	99.5	GSM218294	At_NaCl_cpctry-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
15.1	99.4	GSM128693	Heinekamp_1-2_control-root_Rep1_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
15.0	99.4	GSM131461	AtGen_6-9421_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
15.0	99.4	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
14.7	99.4	GSM184531	Protoplasted root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.7	99.4	GSM184483	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.4	99.4	GSM131349	AtGen_6-4421_Droughtstress-Roots-6.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
14.2	99.4	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
14.1	99.4	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.9	99.4	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
13.6	99.4	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
13.0	99.4	GSM184534	Protoplasted root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.9	99.3	GSM226536	L6SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.8	99.3	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.8	99.3	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.7	99.3	GSM226533	L3SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
11.5	99.3	GSM128695	Heinekamp_1-4_cs-root_Rep1_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
11.4	99.3	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.4	99.3	GSM133892	Schroeder_1-6_JS43-control-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
11.3	99.3	GSM128699	Heinekamp_1-8_cs-root_Rep2_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
11.3	99.3	GSM184481	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.1	99.2	GSM133978	Birnbaum_1-8_StageII-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.0	99.2	GSM131238	AtGen_6-0222_Control-Roots-1.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
11.0	99.2	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.0	99.2	GSM131250	AtGen_6-0422_Control-Roots-6.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
11.0	99.2	GSM131254	AtGen_6-0522_Control-Roots-12.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
11.0	99.2	GSM133891	Schroeder_1-3_JS45-control-48h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
10.7	99.2	GSM131369	AtGen_6-5321_Genotoxicstress-Roots-3.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
10.5	99.2	GSM128703	Heinekamp_1-12_cs-root_Rep3_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
10.4	99.2	GSM184480	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.3	99.2	GSM131405	AtGen_6-7521_UV-Bstress-Roots-12.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
10.2	99.2	GSM226547	Slice5JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.2	99.2	GSM231196	wild-type at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
10.2	99.2	GSM184933	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
10.2	99.2	GSM184536	Protoplasted root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.1	99.2	GSM131353	AtGen_6-4521_Droughtstress-Roots-12.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.9	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922455	-	-	-
9.7	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922509	-	-	-
9.6	99.1	GSM131234	AtGen_6-0122_Control-Roots-0.5h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.4	99.1	GSM131414	AtGen_6-8724_Woundingstress-Roots-0.25h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
9.3	99.1	GSM265426	Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.2	99.1	GSM131253	AtGen_6-0521_Control-Roots-12.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.1	99.1	GSM131225	AtGen_6-0021_Control-Roots-0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.0	99.1	GSM184936	Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
9.0	99.1	GSM218298	At_NaCl_scm-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
9.0	99.1	GSM133991	Birnbaum_1-24_gl2-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.0	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
9.0	99.1	GSM131397	AtGen_6-7321_UV-Bstress-Roots-3.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
8.9	99.0	GSM131257	AtGen_6-0621_Control-Roots-24.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
8.9	99.0	GSM131402	AtGen_6-7422_UV-Bstress-Roots-6.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
8.8	99.0	GSM131466	AtGen_6-9522_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
8.8	99.0	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
8.7	99.0	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
8.7	99.0	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
8.6	99.0	GSM131382	AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)

Back to the CoP portal site

Back to the KAGIANA project homepage