Specifically-expressed experiments

Gene ID At1g52820
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Functional description F:oxidoreductase activity;P:unknown;C:unknown;POBFM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
405.1100.0GSM260881Yap_A2-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
211.8100.0GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
192.9100.0GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
182.9100.0ArrayExpressE-MEXP-791-raw-cel-1122937614---
178.1100.0GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
178.0100.0GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
164.5100.0GSM260880Yap_A1-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
163.799.9ArrayExpressE-MEXP-791-raw-cel-1122937578---
149.699.9GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
148.999.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
138.199.9GSM260882Yap_A1-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
99.899.9GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
87.899.9ArrayExpressE-MEXP-828-raw-cel-1156922659---
79.299.9ArrayExpressE-MEXP-791-raw-cel-1122937596---
76.499.9GSM131559ATGE_9_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
72.699.9GSM131558ATGE_9_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
71.799.9GSM131560ATGE_9_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
70.999.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
65.699.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
63.299.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
62.899.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
59.499.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
56.499.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
53.699.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
51.899.8GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
50.899.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
50.099.8ArrayExpressE-MEXP-828-raw-cel-1156922634---
49.499.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
48.699.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
48.599.8GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
44.899.8GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
44.399.8GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
43.099.8GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
42.099.8ArrayExpressE-MEXP-828-raw-cel-1156922416---
39.699.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
38.899.8GSM131555ATGE_3_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
37.899.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
37.799.7GSM157307Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
35.999.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
35.299.7GSM131556ATGE_3_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
33.999.7GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.799.7GSM290760root - 04% oxygen - 2h - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
32.199.7GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
31.299.7ArrayExpressE-MEXP-828-raw-cel-1156922987---
30.199.7GSM157305Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
29.599.7ArrayExpressE-MEXP-828-raw-cel-1156922684---
27.699.7GSM131557ATGE_3_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
26.999.7GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
24.599.6ArrayExpressE-MEXP-828-raw-cel-1156922891---
24.399.6GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
24.299.6GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
24.199.6ArrayExpressE-MEXP-828-raw-cel-1156922386---
23.899.6GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
22.699.6ArrayExpressE-MEXP-828-raw-cel-1156922438---
22.499.6GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
21.399.6ArrayExpressE-MEXP-828-raw-cel-1156922572---
20.399.6ArrayExpressE-MEXP-828-raw-cel-1156922595---
20.099.6GSM290762root - 04% oxygen - 30min - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
19.399.6ArrayExpressE-MEXP-828-raw-cel-1156922944---
18.399.5GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
17.899.5GSM290756root - 01% oxygen - 30min - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
16.599.5GSM176880AWP_Control_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
16.399.5ArrayExpressE-MEXP-828-raw-cel-1156922750---
16.299.5ArrayExpressE-MEXP-828-raw-cel-1156922553---
15.699.5GSM142619DV002_ATH1_A7-degra-Ec1aGSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
15.299.4ArrayExpressE-MEXP-828-raw-cel-1156922455---
14.499.4ArrayExpressE-MEXP-828-raw-cel-1156922872---
13.599.4GSM291023root - 08% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
13.399.4GSM291112root - 21% oxygen - 30min - CGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
13.299.4GSM291099root - 21% oxygen - 2h - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.799.3ArrayExpressE-MEXP-828-raw-cel-1156922467---
12.099.3ArrayExpressE-MEXP-828-raw-cel-1156922968---
11.999.3GSM176878AWP_AL_Txed_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
11.199.2GSM133894Schroeder_1-12_JS44-starve-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
11.199.2GSM237280Root control rep 1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
11.199.2ArrayExpressE-MEXP-828-raw-cel-1156922613---
10.999.2GSM142621DV002_ATH1_A9-degra-Eg1aGSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
10.899.2ArrayExpressE-MEXP-828-raw-cel-1156922794---
10.699.2GSM131441AtGen_6-9721_Heatstress-Roots-0.25h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.499.2ArrayExpressE-MEXP-828-raw-cel-1156922708---
10.099.2GSM237281Root control rep 2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
9.899.1GSM142620DV002_ATH1_A7-degra-Ec1bGSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.Link to GEO
9.399.1GSM157339Coates_1-11_Col-3_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.399.1ArrayExpressE-MEXP-828-raw-cel-1156922731---
8.999.0GSM291019root - 08% oxygen - 2h - CGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage