Specifically-expressed experiments

Gene ID	At1g52770
Gene name	phototropic-responsive NPH3 family protein
Functional description	F:signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
68.9	99.9	ArrayExpress	E-MEXP-809-raw-cel-1123684141	-	-	-
60.4	99.8	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
55.5	99.8	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
52.4	99.8	GSM133827	Walters_A-06-Kruger-WH3_REP3	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
50.3	99.8	GSM133826	Walters_A-05-Kruger-WH2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
47.6	99.8	GSM134377	St.Clair_1-38_332_Est_0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
46.8	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.3	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
45.8	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.7	99.8	GSM134358	St.Clair_1-19_336_Cvi-1_0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
42.2	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.2	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
38.7	99.8	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
38.5	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
38.5	99.8	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
37.6	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.2	99.7	ArrayExpress	E-MEXP-173-raw-cel-357965452	-	-	-
36.8	99.7	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
36.2	99.7	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
35.7	99.7	GSM133825	Walters_A-04-Kruger-WH1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
33.5	99.7	ArrayExpress	E-MEXP-265-raw-cel-414618093	-	-	-
31.3	99.7	GSM134376	St.Clair_1-37_290_Est_0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
31.1	99.7	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
31.1	99.7	GSM133832	Walters_A-11-Kruger-MH2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
30.9	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.7	99.7	GSM134364	St.Clair_1-25_345_Cvi-1_0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
28.3	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
28.3	99.7	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
28.2	99.7	GSM133831	Walters_A-10-Kruger-MH1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
26.8	99.7	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.3	99.7	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
26.3	99.7	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
26.2	99.7	GSM133833	Walters_A-12-Kruger-MH3_REP3	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
26.2	99.7	GSM134367	St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
26.1	99.7	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.7	99.7	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.5	99.7	GSM134378	St.Clair_1-39_394_Est_0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
23.5	99.6	ArrayExpress	E-MEXP-849-raw-cel-1181980854	-	-	-
23.3	99.6	GSM142809	SS002_ATH1_A1-smith-00h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
20.2	99.6	ArrayExpress	E-MEXP-1967-raw-cel-1710625694	-	-	-
20.1	99.6	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
19.5	99.6	GSM134366	St.Clair_1-27_449_Cvi-1_0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
19.4	99.6	GSM134401	St.Clair_1-98_307_Tsu-1_0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
19.1	99.6	GSM131811	Quick_A38_3-12hr_Rep2_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
17.3	99.5	GSM134375	St.Clair_1-36_454b_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
17.2	99.5	ArrayExpress	E-MEXP-1967-raw-cel-1710625721	-	-	-
17.2	99.5	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.1	99.5	GSM131789	Quick_A63_2-12hr_Rep3_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
17.1	99.5	GSM131817	Quick_A64_3-12hr_Rep3_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
16.9	99.5	GSM131154	AtGen_C-4_1-C-12_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
16.9	99.5	ArrayExpress	E-MEXP-809-raw-cel-1123684158	-	-	-
16.3	99.5	GSM131155	AtGen_C-5_2-C-12_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
16.2	99.5	GSM131763	Quick_A62_1-12hr_Rep3_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
16.2	99.5	GSM131795	Quick_A89_2-12hr_Rep4_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
16.1	99.5	GSM134363	St.Clair_1-24_437_Cvi-1_0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
16.1	99.5	GSM133823	Walters_A-02-Kruger-WL2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
16.1	99.5	GSM38671	DSPS	GSE2268	Arabidopsis polysome microarray
16.0	99.5	ArrayExpress	E-TABM-52-raw-cel-1583683550	-	-	-
15.4	99.5	ArrayExpress	E-TABM-61-raw-cel-683343624	-	-	-
15.3	99.4	GSM131769	Quick_A88_1-12hr_Rep4_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
15.2	99.4	GSM133822	Walters_A-01-Kruger-WL1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
15.2	99.4	GSM131823	Quick_A90_3-12hr_Rep4_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
15.1	99.4	GSM133830	Walters_A-09-Kruger-ML3_REP3	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
15.1	99.4	GSM77065	12h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
14.8	99.4	GSM134373	St.Clair_1-34_346_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
14.5	99.4	GSM134385	St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
14.2	99.4	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.2	99.4	GSM131777	Quick_A11_2-12hr_Rep1_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
13.8	99.4	GSM131783	Quick_A37_2-12hr_Rep2_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
13.6	99.4	GSM131804	Quick_A12_3-12hr_Rep1_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
13.4	99.4	GSM133829	Walters_A-08-Kruger-ML2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
13.3	99.4	GSM131122	AtGen_B-8_1-1-4_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
13.3	99.4	GSM77064	12h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
13.1	99.4	GSM133797	Bird_1-4_high-light-highCO2_Rep1_ATH1	GSE5733	Characterisation of genetic basis of changes in stomatal numbers at elevated atmospheric carbon dioxide concentrations
12.9	99.3	GSM134394	St.Clair_1-91_267b_Tsu-1_0.02%-silwet_Rep1_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
12.7	99.3	GSM134374	St.Clair_1-35_373_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
12.7	99.3	ArrayExpress	E-MEXP-849-raw-cel-1181980862	-	-	-
12.6	99.3	ArrayExpress	E-MEXP-728-raw-cel-1062074512	-	-	-
12.6	99.3	GSM134395	St.Clair_1-92_321_Tsu-1_0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
12.6	99.3	GSM134431	St.Clair_1-56_319_Kin-0_0.02%-silwet_Rep2_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
12.2	99.3	GSM265866	long 14B	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
12.2	99.3	GSM134383	St.Clair_1-44_310_Est_0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
12.2	99.3	GSM133828	Walters_A-07-Kruger-ML1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
12.2	99.3	GSM131757	Quick_A36_1-12hr_Rep2_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
11.8	99.3	ArrayExpress	E-MEXP-849-raw-cel-1181980846	-	-	-
11.8	99.3	GSM142810	SS002_ATH1_A2-smith-01h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
11.6	99.3	GSM131601	ATGE_40_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.6	99.3	GSM134382	St.Clair_1-43_275b_Est_0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
11.6	99.3	GSM134361	St.Clair_1-22_341_Cvi-1_0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
11.5	99.3	GSM133824	Walters_A-03-Kruger-WL3_REP3	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
11.4	99.3	GSM134404	St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
11.4	99.3	GSM265865	long 17B	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
11.4	99.3	GSM266817	camta3-1 biol. rep. 1	GSE10568	camta3 mutant versus wild type microarray analysis
11.3	99.3	GSM131156	AtGen_C-6_3-C-12_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
11.0	99.2	GSM131525	ATGE_18_A	GSE5630	AtGenExpress: Developmental series (leaves)
11.0	99.2	GSM268252	WT-ck-2, biological rep 2	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
10.8	99.2	GSM77186	12h pgm (Col-0) mutant replicate B	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
10.7	99.2	GSM142877	GW001_ATH1_A22-Warre-00f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
10.5	99.2	ArrayExpress	E-MEXP-728-raw-cel-1062074409	-	-	-
10.5	99.2	GSM134403	St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
10.5	99.2	GSM131137	AtGen_B-23_2-2-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.4	99.2	GSM339540	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -2	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
10.3	99.2	ArrayExpress	E-MEXP-174-raw-cel-357966600	-	-	-
10.2	99.2	ArrayExpress	E-MEXP-449-raw-cel-676423133	-	-	-
10.2	99.2	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
10.1	99.2	GSM131751	Quick_A10_1-12hr_Rep1_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
10.1	99.2	GSM128704	Shirras_3-1_LabCalcicole-1mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
10.0	99.2	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
9.9	99.1	ArrayExpress	E-MEXP-449-raw-cel-676423036	-	-	-
9.7	99.1	GSM131123	AtGen_B-9_1-2-4_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.6	99.1	GSM265867	long 12B	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
9.6	99.1	GSM339539	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
9.6	99.1	GSM142895	MW001_ATH1_A3-Wheel-a14_repeat	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
9.5	99.1	GSM131600	ATGE_40_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.5	99.1	GSM134400	St.Clair_1-97_296_Tsu-1_0.02%-silwet_Rep1_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
9.4	99.1	GSM131756	Quick_A32_1-4hr-Rep2_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
9.3	99.1	GSM134430	St.Clair_1-55_269b_Kin-0_0.02%-silwet_Rep1_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
9.2	99.1	GSM134386	St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.2	99.1	GSM131768	Quick_A84_1-4hr-Rep4_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
9.1	99.1	GSM142819	SS002_ATH1_A11-smith-24h_repeat	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
9.1	99.1	GSM250985	pmr5 mutant without treatment, biological rep1	GSE9957	Expression profiling of the plant cell wall mutants: pmr5, pmr6 and pmr5 pmr6 double mutants
9.1	99.1	GSM264763	Tween 0.1% 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
9.1	99.1	GSM134370	St.Clair_1-31_343_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
8.9	99.0	GSM264766	paraquat 20mM 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
8.8	99.0	GSM38669	NSPS	GSE2268	Arabidopsis polysome microarray
8.8	99.0	ArrayExpress	E-TABM-52-raw-cel-1583683262	-	-	-
8.8	99.0	ArrayExpress	E-MEXP-503-raw-cel-821666266	-	-	-
8.8	99.0	GSM265858	control shortB	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
8.6	99.0	GSM134441	St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
8.6	99.0	GSM134379	St.Clair_1-40_285_Est_0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
8.6	99.0	GSM134397	St.Clair_1-94_271_Tsu-1_0.02%-silwet_Rep1_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1

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