CoP: Co-expressed Biological Processes

Specifically-expressed experiments

Gene ID At1g37130

Gene name NIA2 (NITRATE REDUCTASE 2)

Functional description Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.2 99.6 GSM184519 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
17.3 99.5 GSM184516 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
13.8 99.4 GSM184520 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
11.0 99.2 GSM158706 WT-ESTRADIOL-REP2 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
9.1 99.1 GSM158705 HY213-ESTRADIOL-REP2 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
8.7 99.0 GSM158704 HY213-MOCK-REP2 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
8.0 98.9 GSM184517 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
7.5 98.8 GSM184507 Pericycle root cells 2hr transitory KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
7.3 98.8 GSM128775 Eulgem_1-1_Col-0-untreated_Rep1_AG GSE5532 Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2
7.0 98.7 GSM205159 protoplast_KIN10_rep1 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
6.7 98.7 ArrayExpress E-TABM-63-raw-cel-681136944 - - -
6.7 98.7 GSM77057 00h Col-0 replicate C GSE3416 Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
6.5 98.6 GSM184510 Pericycle root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
6.4 98.6 GSM158702 HY213-ESTRADIOL-REP1 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
6.4 98.6 GSM184521 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
6.3 98.6 ArrayExpress E-MEXP-513-raw-cel-829814382 - - -
6.2 98.6 ArrayExpress E-MEXP-513-raw-cel-829814366 - - -
6.0 98.5 GSM142803 SS001_ATH1_A6-Smith-8-45 GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
6.0 98.5 ArrayExpress E-TABM-63-raw-cel-681136979 - - -
6.0 98.5 ArrayExpress E-TABM-63-raw-cel-681137015 - - -

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.2	99.6	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.3	99.5	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.8	99.4	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.0	99.2	GSM158706	WT-ESTRADIOL-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
9.1	99.1	GSM158705	HY213-ESTRADIOL-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
8.7	99.0	GSM158704	HY213-MOCK-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
8.0	98.9	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
7.5	98.8	GSM184507	Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
7.3	98.8	GSM128775	Eulgem_1-1_Col-0-untreated_Rep1_AG	GSE5532	Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2
7.0	98.7	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
6.7	98.7	ArrayExpress	E-TABM-63-raw-cel-681136944	-	-	-
6.7	98.7	GSM77057	00h Col-0 replicate C	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
6.5	98.6	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
6.4	98.6	GSM158702	HY213-ESTRADIOL-REP1	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
6.4	98.6	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
6.3	98.6	ArrayExpress	E-MEXP-513-raw-cel-829814382	-	-	-
6.2	98.6	ArrayExpress	E-MEXP-513-raw-cel-829814366	-	-	-
6.0	98.5	GSM142803	SS001_ATH1_A6-Smith-8-45	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
6.0	98.5	ArrayExpress	E-TABM-63-raw-cel-681136979	-	-	-
6.0	98.5	ArrayExpress	E-TABM-63-raw-cel-681137015	-	-	-

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Gene ID	At1g37130
Gene name	NIA2 (NITRATE REDUCTASE 2)
Functional description	Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.