Specifically-expressed experiments

Gene ID	At1g33960
Gene name	AIG1 (AVRRPT2-INDUCED GENE 1)
Functional description	Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
347.2	100.0	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
239.6	100.0	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
174.6	100.0	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
166.7	100.0	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
163.9	99.9	ArrayExpress	E-ATMX-27-raw-cel-1441080508	-	-	-
162.2	99.9	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
147.3	99.9	ArrayExpress	E-ATMX-27-raw-cel-1441080540	-	-	-
134.1	99.9	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
128.5	99.9	GSM128677	Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
109.8	99.9	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
98.3	99.9	GSM264763	Tween 0.1% 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
79.3	99.9	ArrayExpress	E-ATMX-27-raw-cel-1441080524	-	-	-
74.2	99.9	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
74.2	99.9	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
66.8	99.8	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
65.7	99.8	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
65.1	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
62.6	99.8	GSM128690	Helenius_1-3_ERD15-oex-non-treated_Rep1_ATH1	GSE5521	Comparative ABA-treatment of Col-O vector control and transgenic plants
58.7	99.8	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
52.1	99.8	GSM161535	Control for GR-REV dex treatment: dexamethasone induced Ler seedlings	GSE7003	Experiment to identify downstream targets of Arabidopsis REVOLUTA (HDZIPIII) transcription factor.
51.6	99.8	GSM128660	Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
45.8	99.8	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
39.5	99.8	ArrayExpress	E-MEXP-739-raw-cel-1099467339	-	-	-
38.6	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
37.2	99.7	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
34.4	99.7	GSM264765	paraquat 20mM 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
34.3	99.7	GSM142832	GM001_ATH1_A9-Torres-3N6_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
33.3	99.7	GSM161533	Control for GR-REV dex treatment: mock induced WT Ler seedlings	GSE7003	Experiment to identify downstream targets of Arabidopsis REVOLUTA (HDZIPIII) transcription factor.
32.6	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467330	-	-	-
32.4	99.7	GSM264762	Tween 0.1% 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
30.7	99.7	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
30.3	99.7	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
29.9	99.7	GSM142843	MG001_ATH1_A24-Torres-7N6	GSE6176	Impact of Type III effectors on plant defense responses
29.7	99.7	GSM264764	paraquat 20mM 1h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
29.6	99.7	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
29.4	99.7	ArrayExpress	E-MEXP-711-raw-cel-1563002733	-	-	-
27.9	99.7	GSM128687	Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
27.6	99.7	GSM128684	Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
25.9	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
25.7	99.7	GSM264766	paraquat 20mM 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
25.5	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467294	-	-	-
25.3	99.6	GSM133902	Yang_1-7_CPR5NPR1-1_Rep1_ATH1	GSE5745	Mutant array
25.1	99.6	GSM142587	JB001_ATH1_A2-1-Boyce-cdpk6-yfp-4-1	GSE6147	The role of Cdpk6 in development
24.1	99.6	GSM133708	Short_1-5_ozone_Rep3_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
23.7	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467285	-	-	-
22.5	99.6	GSM264761	Tween 0.1% 1h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
22.2	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467258	-	-	-
22.2	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
21.7	99.6	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
21.3	99.6	GSM269495	mkk1/mkk2, no-treatment, rep-B	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
19.5	99.6	GSM142588	JB001_ATH1_A2-2-Boyce-cdpk6-yfp-4-2	GSE6147	The role of Cdpk6 in development
19.0	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
18.9	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467312	-	-	-
18.9	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467384	-	-	-
18.9	99.5	GSM142842	MG001_ATH1_A23-Torres-7N3	GSE6176	Impact of Type III effectors on plant defense responses
18.9	99.5	GSM216949	Dex-rga(delta17)_shoots_4h_GA4_repl3	GSE8741	DELLA protein direct targets in Arabidopsis
17.9	99.5	GSM269496	mkk1/mkk2, no-treatment, rep-C	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
17.3	99.5	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
17.0	99.5	GSM133054	2796	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
17.0	99.5	GSM142886	MW001_ATH1_A1-Wheel-a05	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
16.8	99.5	GSM133051	2793	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
16.8	99.5	GSM128683	Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.6	99.5	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
15.9	99.5	GSM250966	mil4 with BTH treatment, biological rep3	GSE9955	MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense response
15.7	99.5	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
15.3	99.4	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
15.1	99.4	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.9	99.4	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
14.6	99.4	GSM269498	mkk1/mkk2, 24h after BTH, rep-B	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
14.6	99.4	GSM128691	Helenius_1-4_ERD15 oex-ABA-treated_Rep1_ATH1	GSE5521	Comparative ABA-treatment of Col-O vector control and transgenic plants
14.0	99.4	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.0	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
13.7	99.4	GSM128680	Underwood_1-33_Mock-Inoculum-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.5	99.4	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
13.1	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
12.7	99.3	GSM142895	MW001_ATH1_A3-Wheel-a14_repeat	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
12.6	99.3	ArrayExpress	E-TABM-62-raw-cel-720976113	-	-	-
12.3	99.3	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
12.2	99.3	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.2	99.3	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.2	99.3	GSM133037	2508	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.1	99.3	GSM128673	Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.9	99.3	GSM244448	Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
11.7	99.3	GSM216969	Vector_shoots_4h_GA4_repl2	GSE8741	DELLA protein direct targets in Arabidopsis
11.7	99.3	ArrayExpress	E-ATMX-27-raw-cel-1441080476	-	-	-
11.7	99.3	ArrayExpress	E-TABM-126-raw-cel-1242542009	-	-	-
11.5	99.3	GSM269497	mkk1/mkk2, 24h after BTH, rep-A	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
11.2	99.2	GSM142849	MG001_ATH1_A2-Torres-1N3	GSE6176	Impact of Type III effectors on plant defense responses
11.1	99.2	GSM269499	mkk1/mkk2, 24h after BTH, rep-C	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
11.1	99.2	GSM133905	Yang_1-10_CPR5SCV1-2_Rep2_ATH1	GSE5745	Mutant array
10.9	99.2	GSM133707	Short_1-3_ozone_Rep2_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
10.6	99.2	ArrayExpress	E-TABM-62-raw-cel-720975807	-	-	-
10.2	99.2	GSM133705	Short_1-1_ozone_Rep1_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
10.1	99.2	GSM131112	AtGen_B-40_3-5-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.9	99.1	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.5	99.1	GSM216964	Dex-rga(delta17)_shoots_4h_GA4+DEX_repl3	GSE8741	DELLA protein direct targets in Arabidopsis
9.5	99.1	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.4	99.1	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.3	99.1	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
9.2	99.1	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.1	99.1	GSM142850	MG001_ATH1_A3-Torres-1N6	GSE6176	Impact of Type III effectors on plant defense responses
9.1	99.1	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
9.0	99.1	GSM77182	00h pgm (Col-0) mutant replicate B	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
8.6	99.0	GSM216947	Dex-rga(delta17)_shoots_4h_GA4_repl2	GSE8741	DELLA protein direct targets in Arabidopsis

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