| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 104.3 | 99.9 | GSM290758 | root - 01% oxygen - 48h - A | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants |  |
| 43.6 | 99.8 | GSM253166 | 48h into an extended nightC | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 38.3 | 99.8 | ArrayExpress | E-MEXP-285-raw-cel-440782725 | - | - | - |
| 37.0 | 99.7 | ArrayExpress | E-MEXP-285-raw-cel-440782791 | - | - | - |
| 35.5 | 99.7 | GSM133304 | RIKEN-NAKABAYASHI1B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 31.3 | 99.7 | GSM253165 | 48h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 30.0 | 99.7 | GSM253163 | 24h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 29.8 | 99.7 | GSM253164 | 24h into an extended nightC | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 24.8 | 99.6 | GSM154503 | Arabidopsis desiccated mature pollen grains rep1 | GSE6696 | Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis | |
| 22.6 | 99.6 | GSM128662 | Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1 | GSE5520 | Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction | |
| 19.1 | 99.6 | GSM131298 | AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 19.1 | 99.6 | GSM131306 | AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 18.3 | 99.5 | GSM142628 | MC002_ATH1_A2.3-dubos-wtc | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 17.4 | 99.5 | GSM142624 | MC002_ATH1_A1.2-dubos-wtx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 17.4 | 99.5 | GSM253161 | 8h into an extended nightA | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 17.1 | 99.5 | GSM131302 | AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 16.4 | 99.5 | ArrayExpress | E-MEXP-1299-raw-cel-1519902871 | - | - | - |
| 16.3 | 99.5 | GSM133117 | RIKEN-YAMAUCHI1A | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 16.2 | 99.5 | ArrayExpress | E-MEXP-1094-raw-cel-1379507513 | - | - | - |
| 15.1 | 99.4 | GSM142625 | MC002_ATH1_A1.3-dubos-wtx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 14.8 | 99.4 | GSM131305 | AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 14.4 | 99.4 | GSM142623 | MC002_ATH1_A1.1-dubos-wtx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 14.1 | 99.4 | GSM128661 | Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1 | GSE5520 | Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction | |
| 13.8 | 99.4 | GSM142642 | MC002_ATH1_A7.2-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 13.6 | 99.4 | GSM142643 | MC002_ATH1_A7.3-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 13.6 | 99.4 | GSM40553 | Total RNA - hypoxia stress | GSE2218 | Changes in transcript abundance and association with large polysomes in response to hypoxia stress | |
| 13.6 | 99.4 | ArrayExpress | E-MEXP-1094-raw-cel-1379507473 | - | - | - |
| 13.5 | 99.4 | ArrayExpress | E-MEXP-1094-raw-cel-1379507433 | - | - | - |
| 13.2 | 99.4 | GSM142594 | DB001_ATH1_A4-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 13.2 | 99.4 | GSM131294 | AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 13.0 | 99.4 | ArrayExpress | E-MEXP-1094-raw-cel-1379507313 | - | - | - |
| 12.9 | 99.3 | GSM133303 | RIKEN-NAKABAYASHI1A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 12.8 | 99.3 | GSM245469 | 9 hr Hypoxia Stress Total RNA Rep 1 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 12.8 | 99.3 | GSM253160 | 6h into an extended night | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 12.7 | 99.3 | GSM131637 | ATGE_73_B | GSE5632 | AtGenExpress: Developmental series (flowers and pollen) | |
| 12.7 | 99.3 | GSM239251 | Columbia glabrous (C24) wild type pollen | GSE9408 | Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis | |
| 12.7 | 99.3 | GSM131293 | AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 12.6 | 99.3 | GSM142641 | MC002_ATH1_A7.1-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 12.3 | 99.3 | GSM265413 | Arabidopsis, whole roots, -Fe, replicate 3 | GSE10496 | Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) | |
| 12.2 | 99.3 | GSM245916 | wild type dark replicate 1 | GSE9728 | COP9 signalosome (csn) mutant analysis | |
| 11.8 | 99.3 | GSM142596 | DB001_ATH1_A6-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 11.7 | 99.3 | ArrayExpress | E-MEXP-148-raw-cel-350529179 | - | - | - |
| 11.7 | 99.3 | GSM128683 | Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1 | GSE5520 | Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction | |
| 11.6 | 99.3 | GSM133892 | Schroeder_1-6_JS43-control-96h_Rep1_ATH1 | GSE5744 | Response to potassium starvation in roots | |
| 11.6 | 99.3 | GSM226268 | WT(Ler)_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks | |
| 11.6 | 99.3 | GSM142629 | MC002_ATH1_A3.1-dubos-6kx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 11.4 | 99.3 | ArrayExpress | E-MEXP-1299-raw-cel-1519902498 | - | - | - |
| 11.1 | 99.2 | GSM142648 | MC002_ATH1_A9.2-dubos-aah | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 11.1 | 99.2 | GSM142626 | MC002_ATH1_A2.1-dubos-wtc | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 11.1 | 99.2 | GSM239253 | CaMV::DME pollen | GSE9408 | Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis | |
| 10.9 | 99.2 | ArrayExpress | E-MEXP-1094-raw-cel-1379507553 | - | - | - |
| 10.6 | 99.2 | GSM142592 | DB001_ATH1_A2-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 10.6 | 99.2 | GSM131301 | AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 10.3 | 99.2 | ArrayExpress | E-MEXP-1299-raw-cel-1519903415 | - | - | - |
| 10.1 | 99.2 | GSM282698 | Col_BRZ_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 10.1 | 99.2 | GSM27364 | lec1-1 Rosette Leaf | GSE680 | Transcript Profiling of Arabidopsis Plant Life Cycle | |
| 9.9 | 99.1 | ArrayExpress | E-ATMX-31-raw-cel-1516948018 | - | - | - |
| 9.8 | 99.1 | GSM142644 | MC002_ATH1_A8.1-dubos-aih | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 9.7 | 99.1 | ArrayExpress | E-MEXP-1138-raw-cel-1432773066 | - | - | - |
| 9.7 | 99.1 | GSM253162 | 8h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 9.7 | 99.1 | GSM131638 | ATGE_73_C | GSE5632 | AtGenExpress: Developmental series (flowers and pollen) | |
| 9.7 | 99.1 | ArrayExpress | E-MEXP-1138-raw-cel-1432772970 | - | - | - |
| 9.6 | 99.1 | GSM142646 | MC002_ATH1_A8.3-dubos-aih | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 9.6 | 99.1 | GSM265412 | Arabidopsis, whole roots, -Fe, replicate 2 | GSE10496 | Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) | |
| 9.5 | 99.1 | ArrayExpress | E-MEXP-1094-raw-cel-1379507273 | - | - | - |
| 9.5 | 99.1 | ArrayExpress | E-MEXP-1138-raw-cel-1432773034 | - | - | - |
| 9.2 | 99.1 | GSM142649 | MC002_ATH1_A9.3-dubos-aah | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 9.2 | 99.1 | GSM253159 | 4h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 9.2 | 99.1 | GSM128654 | Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1 | GSE5520 | Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction | |
| 9.0 | 99.1 | ArrayExpress | E-MEXP-1138-raw-cel-1432773130 | - | - | - |
| 8.9 | 99.0 | ArrayExpress | E-MEXP-1138-raw-cel-1432772682 | - | - | - |
| 8.9 | 99.0 | GSM282700 | Col_mock_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 8.8 | 99.0 | ArrayExpress | E-MEXP-1138-raw-cel-1432772938 | - | - | - |
| 8.7 | 99.0 | GSM245489 | 9 hr Hypoxia Stress Total RNA Rep 3 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 8.7 | 99.0 | GSM128677 | Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1 | GSE5520 | Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction | |
