Specifically-expressed experiments

Gene ID	At1g30080
Gene name	glycosyl hydrolase family 17 protein
Functional description	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
238.2	100.0	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
86.7	99.9	GSM184904	Arabidopsis, root cells, protophloem, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
70.8	99.9	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
62.4	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
61.3	99.8	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
60.6	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
59.7	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
58.7	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.7	99.8	GSM131608	ATGE_42_D	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
57.5	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
50.3	99.8	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
49.6	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.2	99.8	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
46.8	99.8	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
45.1	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
44.9	99.8	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
44.6	99.8	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
43.9	99.8	ArrayExpress	E-ATMX-31-raw-cel-1516948001	-	-	-
43.1	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.3	99.8	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
36.0	99.7	GSM75511	Col-0 6h MOCK replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
35.8	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.3	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.8	99.7	GSM75517	slr-1 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
33.2	99.7	GSM184906	Arabidopsis, root cells, protophloem, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
33.0	99.7	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
32.6	99.7	GSM75513	Col-0 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
32.2	99.7	GSM131606	ATGE_42_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
32.0	99.7	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
31.4	99.7	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
30.4	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922987	-	-	-
29.9	99.7	GSM75509	Col-0 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
29.8	99.7	GSM184923	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
28.2	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.7	99.7	GSM131466	AtGen_6-9522_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
26.7	99.7	GSM75520	slr-1 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
24.1	99.6	GSM131564	ATGE_94_A	GSE5631	AtGenExpress: Developmental series (roots)
22.8	99.6	GSM311294	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
21.4	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922509	-	-	-
21.3	99.6	GSM75515	Col-0 6h MOCK replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
21.0	99.6	GSM284395	Arabidopsis GPSc1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
20.9	99.6	GSM131565	ATGE_94_B	GSE5631	AtGenExpress: Developmental series (roots)
20.9	99.6	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
20.8	99.6	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
20.5	99.6	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
20.1	99.6	GSM184924	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
19.6	99.6	GSM131611	ATGE_43_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.3	99.6	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.1	99.6	GSM133129	S0_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
19.0	99.5	GSM131465	AtGen_6-9521_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
18.1	99.5	GSM131609	ATGE_43_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
18.0	99.5	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.8	99.5	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
17.5	99.5	GSM131610	ATGE_43_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.5	99.5	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
17.3	99.5	GSM131607	ATGE_42_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.1	99.5	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
16.9	99.5	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
16.9	99.5	ArrayExpress	E-ATMX-33-raw-cel-1562596197	-	-	-
16.7	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922455	-	-	-
16.7	99.5	GSM131354	AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
16.7	99.5	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
16.6	99.5	GSM266675	Arabidopsis, root cells, stele, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
16.6	99.5	GSM75514	Col-0 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
16.4	99.5	GSM284396	Arabidopsis GPSc2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
15.9	99.5	GSM133136	S1500_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
15.2	99.4	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
15.0	99.4	GSM133959	Fukuda_1-4_2B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
14.9	99.4	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.9	99.4	GSM265464	Arabidopsis, whole roots, -Fe, 3 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
14.7	99.4	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.6	99.4	GSM131350	AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
14.5	99.4	GSM75510	Col-0 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
14.4	99.4	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
14.2	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
14.1	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922485	-	-	-
14.0	99.4	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.0	99.4	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
13.1	99.4	GSM184921	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
12.9	99.3	GSM131566	ATGE_94_C	GSE5631	AtGenExpress: Developmental series (roots)
12.9	99.3	GSM184905	Arabidopsis, root cells, protophloem, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.8	99.3	GSM131341	AtGen_6-4221_Droughtstress-Roots-1.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
12.4	99.3	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
12.2	99.3	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
12.1	99.3	GSM157307	Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
12.0	99.3	GSM179959	Arabidopsis roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.7	99.3	GSM133142	S1500_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
11.4	99.3	ArrayExpress	E-ATMX-31-raw-cel-1516947984	-	-	-
11.1	99.2	GSM179974	Arabidopsis roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.0	99.2	GSM133138	S1500_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.9	99.2	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.9	99.2	GSM131664	ATGE_46_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.7	99.2	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.7	99.2	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.6	99.2	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.5	99.2	GSM131342	AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
10.5	99.2	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.4	99.2	GSM75512	Col-0 0h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.3	99.2	ArrayExpress	E-MEXP-265-raw-cel-414619001	-	-	-
10.1	99.2	GSM131434	AtGen_6-8525_Woundingstress-Roots-12.0h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
10.0	99.2	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.0	99.2	GSM265471	Arabidopsis, whole roots, -Fe, 48 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.0	99.2	GSM133126	S0_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.0	99.2	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
9.9	99.1	GSM157310	Gan_1-6_mutant-nitrate-continuous(ANC)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
9.8	99.1	GSM179973	Arabidopsis roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.6	99.1	GSM184920	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
9.5	99.1	ArrayExpress	E-MEXP-265-raw-cel-414618693	-	-	-
9.5	99.1	GSM133987	Birnbaum_1-17_wol-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.4	99.1	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.4	99.1	GSM133718	Urwin_A-2-Urwin-Inf_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
9.2	99.1	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.1	99.1	GSM131253	AtGen_6-0521_Control-Roots-12.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.0	99.1	GSM142673	SF001_ATH1_A3-Fille-ANGR4-12	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
9.0	99.1	GSM266676	Arabidopsis, root cells, stele, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.0	99.1	ArrayExpress	E-ATMX-31-raw-cel-1516948018	-	-	-
8.7	99.0	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings

Back to the CoP portal site

Back to the KAGIANA project homepage