Specifically-expressed experiments

Gene ID	At1g29460
Gene name	auxin-responsive protein, putative
Functional description	F:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
108.8	99.9	GSM133818	Yang_1-3_young-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
97.7	99.9	GSM173447	oxt6 mutant, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
84.6	99.9	GSM173446	oxt6 mutant, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
73.5	99.9	GSM133860	Beynon_1-3-cat-SpikeMix3_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
70.0	99.9	GSM133859	Beynon_1-2-cat-SpikeMix2_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
49.3	99.8	GSM133864	Beynon_1-7-cat-SpikeMix7_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
46.8	99.8	GSM133820	Yang_1-5_young-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
43.0	99.8	ArrayExpress	E-MEXP-1454-raw-cel-1585858399	-	-	-
42.7	99.8	GSM133784	Brueggemann_A-2-Brueg-uva_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
41.1	99.8	GSM133858	Beynon_1-1-cat-SpikeMix1_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
39.6	99.8	GSM77177	04h low CO2 + dark replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
38.4	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
35.5	99.7	GSM170940	abh1 +ABA repl2	GSE7112	Abscisic acid effect on wild type and the abh1 mutant
29.8	99.7	ArrayExpress	E-MEXP-1454-raw-cel-1585858473	-	-	-
29.3	99.7	GSM133821	Yang_1-6_old-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
28.4	99.7	GSM253157	2h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
27.1	99.7	GSM133863	Beynon_1-6-cat-SpikeMix6_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
26.1	99.7	GSM62696	Columbia flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
25.8	99.7	ArrayExpress	E-MEXP-1454-raw-cel-1585858071	-	-	-
25.8	99.7	GSM170930	abh1 -ABA repl2	GSE7112	Abscisic acid effect on wild type and the abh1 mutant
25.7	99.7	GSM173445	oxt6 mutant, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
25.3	99.6	GSM142823	PJ002_ATH1_A4-jarvis-iae2	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
25.2	99.6	ArrayExpress	E-MEXP-1454-raw-cel-1585858254	-	-	-
24.9	99.6	GSM170923	Col-0 -ABA repl2	GSE7112	Abscisic acid effect on wild type and the abh1 mutant
24.4	99.6	GSM139895	WT_non-polysome_rep1	GSE6024	eif3h/WT polysome loading
24.2	99.6	ArrayExpress	E-MEXP-1454-raw-cel-1585857887	-	-	-
23.5	99.6	GSM260958	A6-LLOYD-CON_REP3	GSE10326	Transcriptome analysis of pho3
23.3	99.6	ArrayExpress	E-MEXP-265-raw-cel-414618693	-	-	-
22.9	99.6	GSM133785	Brueggemann_A-3-Brueg-vis_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
22.5	99.6	GSM133865	Beynon_1-8-cat-ReferenceMix_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
22.3	99.6	GSM142771	AM001_ATH1_Control	GSE6168	Comparison of the transcript profile of the auxin resistant axr4 mutant and wild-type Col0
21.3	99.6	ArrayExpress	E-MEXP-265-raw-cel-414619001	-	-	-
20.2	99.6	ArrayExpress	E-MEXP-1454-raw-cel-1585858181	-	-	-
20.0	99.6	GSM25863	IAA Treated - 2	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
19.9	99.6	GSM131060	Hammond_2-1_Col2wildtype_Rep1_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
19.6	99.6	ArrayExpress	E-MEXP-285-raw-cel-440783213	-	-	-
19.3	99.6	GSM170899	abh1 -ABA repl1	GSE7112	Abscisic acid effect on wild type and the abh1 mutant
19.1	99.6	GSM128653	Underwood_1-6_Cor-hrpS-10e6-24h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.7	99.5	GSM128657	Underwood_1-10_Mock-Inoculum-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.3	99.5	GSM128659	Underwood_1-12_Mock-Inoculum-24h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
17.7	99.5	GSM128705	Shirras_3-2_LabCalcifuge-1mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
17.3	99.5	GSM128707	Shirras_3-4_LabCalcifuge-12.5mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
17.2	99.5	ArrayExpress	E-MEXP-715-raw-cel-1121836113	-	-	-
17.2	99.5	GSM133862	Beynon_1-5-cat-SpikeMix5_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
17.0	99.5	GSM133861	Beynon_1-4-cat-SpikeMix4_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
16.8	99.5	ArrayExpress	E-MEXP-1454-raw-cel-1585858217	-	-	-
16.8	99.5	GSM142817	SS002_ATH1_A9-smith-16h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
16.6	99.5	GSM142825	PJ002_ATH1_A6-jarvis-iae2	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
16.4	99.5	ArrayExpress	E-MEXP-1454-raw-cel-1585858145	-	-	-
16.4	99.5	GSM268246	dor-ck-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
16.4	99.5	ArrayExpress	E-MEXP-443-raw-cel-669122945	-	-	-
16.1	99.5	GSM253158	4h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
15.9	99.5	ArrayExpress	E-MEXP-1454-raw-cel-1585858291	-	-	-
15.9	99.5	GSM131440	AtGen_6-9712_Heatstress-Shoots-0.25h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
15.2	99.4	ArrayExpress	E-MEXP-715-raw-cel-1121836221	-	-	-
14.7	99.4	ArrayExpress	E-MEXP-285-raw-cel-440783152	-	-	-
14.5	99.4	ArrayExpress	E-ATMX-32-raw-cel-1562974425	-	-	-
14.4	99.4	GSM131455	AtGen_6-9811_Heatstress(3h)+1hrecovery-Shoots-4.0h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
14.3	99.4	GSM128711	Shirras_3-8_WildEcotype-high-soil-pH-12.5mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
14.3	99.4	ArrayExpress	E-MEXP-1454-raw-cel-1585858107	-	-	-
14.0	99.4	ArrayExpress	E-MEXP-1454-raw-cel-1585858437	-	-	-
13.9	99.4	GSM151695	Col-0 uninoculated, biological replicate 2	GSE6556	Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
13.6	99.4	GSM142887	MW001_ATH1_A1-Wheel-a14	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
13.5	99.4	GSM170911	abh1 +ABA repl1	GSE7112	Abscisic acid effect on wild type and the abh1 mutant
13.5	99.4	GSM131218	Scrase-Field_1-2_camta1-2-Col-0_Rep1_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
13.5	99.4	ArrayExpress	E-MEXP-715-raw-cel-1121836247	-	-	-
13.0	99.4	GSM133782	Brueggemann_A-6-Brueg-Pps_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
12.9	99.3	GSM128702	Heinekamp_1-11_cs-shoot_Rep3_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
12.8	99.3	GSM292077	Wt, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
12.8	99.3	ArrayExpress	E-MEXP-1454-raw-cel-1585858363	-	-	-
12.7	99.3	GSM157342	Durrant_1-2_wild-type_Rep2_ATH1	GSE6827	Comparison of transcriptional profiles between sni1 and wild type
12.7	99.3	ArrayExpress	E-MEXP-265-raw-cel-414618585	-	-	-
12.7	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121836087	-	-	-
12.6	99.3	GSM25875	IAA/A Treated - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
12.5	99.3	GSM268008	Col-0, Time 0, rep-A	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
12.3	99.3	GSM131062	Hammond_2-3_Col2wildtype_Rep2_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
12.2	99.3	GSM25877	IAA/B Treated - 2	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
11.8	99.3	ArrayExpress	E-MEXP-1454-raw-cel-1585858545	-	-	-
11.8	99.3	GSM253162	8h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
11.7	99.3	GSM157311	Hammond_3-1_Control-shoot_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
11.6	99.3	GSM292079	pif1-2, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
11.5	99.3	GSM292081	pif1-2, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
11.5	99.3	ArrayExpress	E-ATMX-32-raw-cel-1562974645	-	-	-
11.5	99.3	GSM142824	PJ002_ATH1_A5-jarvis-iae2	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
11.5	99.3	GSM133729	Buchanan-Wollaston_A-1-bwoll-C0G_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
11.4	99.3	GSM260957	A5-LLOYD-CON_REP2	GSE10326	Transcriptome analysis of pho3
11.4	99.3	ArrayExpress	E-MEXP-443-raw-cel-669122936	-	-	-
11.2	99.2	GSM157303	JPritchard_A-5_API_Rep2_ATH1	GSE6823	The molecular basis of plant insect interactions
11.1	99.2	GSM142589	JB001_ATH1_A3-1-Boyce-Kan-3	GSE6147	The role of Cdpk6 in development
10.8	99.2	ArrayExpress	E-MEXP-1454-raw-cel-1585857925	-	-	-
10.7	99.2	GSM131256	AtGen_6-0612_Control-Shoots-24.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
10.7	99.2	GSM77056	00h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
10.6	99.2	GSM151694	Col-0 uninoculated, biological replicate 1	GSE6556	Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
10.6	99.2	GSM151696	Col-0 uninoculated, biological replicate 3	GSE6556	Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
10.5	99.2	GSM157299	JPritchard_A-1_CTR_Rep1_ATH1	GSE6823	The molecular basis of plant insect interactions
10.5	99.2	GSM131171	AtGen_D-3_1-PL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
10.5	99.2	GSM131220	Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
10.4	99.2	GSM131175	AtGen_D-7_1-UL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
10.2	99.2	GSM25878	IAA/B Treated - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
10.1	99.2	GSM77055	00h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
9.9	99.1	GSM292080	pif1-2, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
9.9	99.1	ArrayExpress	E-ATMX-32-raw-cel-1562974462	-	-	-
9.9	99.1	GSM142821	PJ002_ATH1_A2-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
9.9	99.1	GSM142897	MW001_ATH1_A3-Wheel-w14	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
9.8	99.1	GSM292078	Wt, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
9.8	99.1	GSM131260	AtGen_6-1112_Cold(4°C)-Shoots-0.5h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.5	99.1	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.5	99.1	ArrayExpress	E-ATMX-32-raw-cel-1562974665	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-509-raw-cel-829148913	-	-	-
9.3	99.1	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.3	99.1	GSM131221	Kadalayil_1-1_wildtype_Rep1_ATH1	GSE5619	Functional studies of a new Arabidopsis SH2 domain-containing gene
9.2	99.1	GSM268248	WT-ck-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
9.1	99.1	GSM62699	arf6/arf6 ARF8/arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
9.1	99.1	GSM131215	AtGen_D-17_2-DL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.1	99.1	ArrayExpress	E-MEXP-1451-raw-cel-1585200298	-	-	-
9.0	99.1	ArrayExpress	E-MEXP-1451-raw-cel-1585200362	-	-	-
9.0	99.1	ArrayExpress	E-MEXP-1454-raw-cel-1585858327	-	-	-
8.9	99.0	GSM131456	AtGen_6-9812_Heatstress(3h)+1hrecovery-Shoots-4.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
8.9	99.0	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.7	99.0	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
8.7	99.0	GSM142826	PJ002_ATH1_A7-jarvis-B1798	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
8.7	99.0	ArrayExpress	E-ATMX-33-raw-cel-1562596288	-	-	-
8.7	99.0	GSM25873	IAA/A Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis

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