Specifically-expressed experiments

Gene ID	At1g20840
Gene name	TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1)
Functional description	The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.2	99.7	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
23.1	99.6	GSM157335	Coates_1-7_Col-3_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
22.9	99.6	GSM157334	Coates_1-6_ara1OX_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
22.2	99.6	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
21.8	99.6	GSM157306	Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
21.5	99.6	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
19.8	99.6	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
19.4	99.6	GSM157329	Coates_1-1_Col-0_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
18.7	99.5	GSM157307	Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
16.6	99.5	GSM157323	Hammond_3-16_Control-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
16.1	99.5	ArrayExpress	Millenaar_A3_LL_Rep1_ATH1	-	-	-
15.8	99.5	GSM157305	Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
15.6	99.5	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
15.4	99.5	ArrayExpress	Millenaar_A6_LL_Rep3_ATH1	-	-	-
14.7	99.4	GSM157339	Coates_1-11_Col-3_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
14.5	99.4	GSM237280	Root control rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
14.0	99.4	ArrayExpress	Millenaar_A3_LL_Rep2_ATH1	-	-	-
13.8	99.4	GSM157314	Hammond_3-4_Control-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.7	99.4	GSM157315	Hammond_3-5_Potassium-starved-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.4	99.4	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.1	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937596	-	-	-
13.0	99.4	GSM142728	CH001_ATH1_A007-Hampt-c4b	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
12.7	99.3	GSM131566	ATGE_94_C	GSE5631	AtGenExpress: Developmental series (roots)
12.5	99.3	GSM157340	Coates_1-12_ara1/2mut_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
12.3	99.3	GSM133284	RIKEN-GODA4B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
12.1	99.3	ArrayExpress	Rente_1-4_KKO-Control_Rep1_ATH1	-	-	-
11.9	99.3	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
11.6	99.3	GSM142721	CH001_ATH1_A001-Hampt-wsa	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.6	99.3	GSM237281	Root control rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
11.4	99.3	GSM131570	ATGE_98_A	GSE5631	AtGenExpress: Developmental series (roots)
11.3	99.3	GSM133283	RIKEN-GODA4A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
11.3	99.3	ArrayExpress	E-MEXP-1094-raw-cel-1379507473	-	-	-
11.3	99.3	GSM157327	Hammond_3-11_Potassium-starved-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
11.1	99.2	GSM142730	CH001_ATH1_A009-Hampt-wsc_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
10.9	99.2	GSM157326	Hammond_3-10_Control-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
10.6	99.2	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
10.6	99.2	GSM157336	Coates_1-8_ara1/2mut_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.6	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138853	-	-	-
10.5	99.2	ArrayExpress	E-MEXP-1094-raw-cel-1379507433	-	-	-
10.4	99.2	GSM142733	CH001_ATH1_A012-Hampt-c1c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
10.3	99.2	GSM157333	Coates_1-5_Col-0_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.3	99.2	ArrayExpress	Millenaar_A1_AIR_Rep1_ATH1	-	-	-
10.1	99.2	GSM142732	CH001_ATH1_A011-Hampt-c4c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
10.1	99.2	GSM133273	RIKEN-GODA8A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
10.1	99.2	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.0	99.2	GSM142731	CH001_ATH1_A010-Hampt-akc	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
10.0	99.2	GSM131571	ATGE_98_B	GSE5631	AtGenExpress: Developmental series (roots)
9.8	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138787	-	-	-
9.8	99.1	GSM142724	CH001_ATH1_A003-Hampt-c4a_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
9.6	99.1	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
9.6	99.1	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
9.6	99.1	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.6	99.1	GSM157325	Hammond_3-18_Caesium-treated-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
9.5	99.1	ArrayExpress	Capper_1-9_E6_estradiol	-	-	-
9.4	99.1	ArrayExpress	Capper_1-11_E10_estradiol	-	-	-
9.3	99.1	GSM133253	RIKEN-GODA11A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
9.3	99.1	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.2	99.1	GSM133277	RIKEN-GODA1A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
9.1	99.1	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.1	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922342	-	-	-
9.0	99.1	ArrayExpress	Capper_1-6_C3_water	-	-	-
9.0	99.1	ArrayExpress	Capper_1-10_E6_water	-	-	-
9.0	99.1	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.0	99.1	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
9.0	99.1	GSM157330	Coates_1-2_ara1OX_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.0	99.1	GSM142725	CH001_ATH1_A004-Hampt-c1a	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
8.9	99.0	GSM142723	CH001_ATH1_A002-Hampt-aka	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
8.9	99.0	GSM133257	RIKEN-GODA13A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
8.8	99.0	GSM157309	Gan_1-5_wildtype-nitrate-continuous(WNC)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
8.8	99.0	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
8.7	99.0	GSM133258	RIKEN-GODA13B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
8.6	99.0	GSM157331	Coates_1-3_Col-3_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
8.6	99.0	ArrayExpress	E-MEXP-1468-raw-cel-1591138655	-	-	-

Back to the CoP portal site

Back to the KAGIANA project homepage