Specifically-expressed experiments

Gene ID At1g20390
Gene name transposable element gene
Functional description F:unknown;P:unknown;C:unknown

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
182.6100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
158.899.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
135.599.9GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
116.299.9GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
88.399.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
77.399.9GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
72.199.9ArrayExpressE-MEXP-1468-raw-cel-1591138787---
64.799.8GSM133254RIKEN-GODA11B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
64.799.8GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
64.199.8ArrayExpressE-MEXP-1468-raw-cel-1591138919---
58.699.8GSM282696arf2_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
47.099.8ArrayExpressE-MEXP-1468-raw-cel-1591138688---
46.299.8GSM133263RIKEN-GODA3A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
45.899.8GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
44.099.8GSM282700Col_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
40.699.8GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
40.699.8ArrayExpressE-MEXP-1468-raw-cel-1591138655---
40.099.8GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
37.999.8GSM133276RIKEN-GODA9B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
37.299.7GSM319209Dark-grown WT control (vector#4) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
36.899.7GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
35.899.7GSM133264RIKEN-GODA3B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
35.299.7GSM282694arf2_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
34.999.7GSM133273RIKEN-GODA8A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
34.199.7GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
33.899.7GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
33.699.7GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
33.199.7GSM245924csn4-1_mutant_dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
33.099.7ArrayExpressE-MEXP-1468-raw-cel-1591138985---
33.099.7ArrayExpressE-MEXP-1468-raw-cel-1591138952---
32.499.7GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
30.399.7GSM133270RIKEN-GODA6B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
30.199.7ArrayExpressE-MEXP-1468-raw-cel-1591139018---
28.399.7GSM133262RIKEN-GODA2B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
27.499.7GSM319208Dark-grown WT control (vector#1) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
26.699.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
26.299.7GSM133268RIKEN-GODA5B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
26.099.7GSM282702Col_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
25.999.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
24.999.6GSM133261RIKEN-GODA2A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
24.599.6GSM133274RIKEN-GODA8B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
23.499.6GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
23.299.6GSM133260RIKEN-GODA1B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
22.199.6GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
21.699.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
21.599.6GSM133272RIKEN-GODA7B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
21.299.6ArrayExpressE-NASC-78-raw-cel-1463195283---
21.299.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
21.099.6GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
20.799.6GSM133251RIKEN-GODA10A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.999.6GSM133266RIKEN-GODA4B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.899.6GSM159301CCA1-34_dark_late_rep1GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
19.599.6GSM133275RIKEN-GODA9A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.299.6ArrayExpressE-MEXP-1468-raw-cel-1591138754---
18.899.5ArrayExpressE-MEXP-1468-raw-cel-1591138721---
18.799.5GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
18.699.5GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
18.699.5GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.999.5GSM134775Col-0_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
17.999.5GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
17.199.5ArrayExpressE-NASC-78-raw-cel-1463195171---
17.199.5ArrayExpressE-ATMX-33-raw-cel-1562596264---
17.199.5ArrayExpressE-NASC-78-raw-cel-1463195203---
16.599.5GSM134783gun1-1_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
16.499.5GSM133259RIKEN-GODA1A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.399.5ArrayExpressE-TABM-63-raw-cel-681137195---
16.299.5GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
16.299.5GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.099.5GSM319210Dark-grown WT control (vector#7) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
15.899.5GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
15.799.5GSM133269RIKEN-GODA6A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
15.699.5GSM159321CCA1-34_dark_early_rep3GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
15.399.4ArrayExpressE-MEXP-1468-raw-cel-1591138886---
15.299.4GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
15.199.4GSM133265RIKEN-GODA4A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
15.099.4GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
14.699.4ArrayExpressE-NASC-78-raw-cel-1463195251---
14.599.4GSM158680Col_dark_early_rep1GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
14.599.4GSM159304CCA1-34_dark_late_rep2GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
14.199.4GSM134782gun1-1_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
14.099.4GSM159273Col_dark_early_rep2GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
13.899.4GSM159302CCA1-34_dark_early_rep2GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
13.599.4GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.599.4GSM176878AWP_AL_Txed_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
13.499.4GSM133267RIKEN-GODA5A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
13.099.4GSM134777Col-0_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
12.999.3GSM245923csn4-1_mutant_dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
12.899.3GSM159300CCA1-34_dark_early_rep1GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
12.899.3GSM133271RIKEN-GODA7A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
12.599.3GSM277234Arabidopsis vip3_1GSE10928Arabidopsis wild-type vs. vip3Link to GEO
12.499.3GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
12.199.3GSM133255RIKEN-GODA12A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
11.899.3GSM305281control, biological replicate 1GSE12137LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thalianaLink to GEO
11.899.3ArrayExpressE-MEXP-838-raw-cel-1160704020---
11.799.3GSM161536Experiment:Dexamethasone induction of GR-REV transgenic Ler seedlingsGSE7003Experiment to identify downstream targets of Arabidopsis REVOLUTA (HDZIPIII) transcription factor. Link to GEO
11.799.3GSM133726McCormac_1-4_wildtype-NFtreated_Rep2_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
11.599.3GSM133728McCormac_1-6_mutant-NFtreated_Rep2_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
11.399.3GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.099.2ArrayExpressE-TABM-63-raw-cel-681137052---
10.599.2ArrayExpressE-ATMX-33-raw-cel-1562596310---
10.499.2GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.299.2GSM134515Col-0_4day_dark_+lincomycin_rep1GSE5759red illumination w/o lincomycinLink to GEO
9.899.1GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.799.1GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.699.1ArrayExpressE-MEXP-838-raw-cel-1160703990---
9.599.1GSM153923No ABA control rep2GSE6638Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABALink to GEO
9.599.1GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
9.499.1ArrayExpressE-MEXP-838-raw-cel-1160704054---
9.499.1ArrayExpressE-TABM-63-raw-cel-681137124---
9.399.1ArrayExpressE-MEXP-1468-raw-cel-1591138853---
9.299.1GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
8.999.0GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.999.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
8.899.0GSM159299Col_dark_late_rep3GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
8.799.0ArrayExpressE-MEXP-444-raw-cel-670291619---



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