Specifically-expressed experiments

Gene ID At1g19300
Gene name PARVUS (PARVUS)
Functional description The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
173.3100.0GSM131655ATGE_27_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
162.799.9GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
144.399.9ArrayExpressE-MEXP-265-raw-cel-414618394---
134.699.9ArrayExpressE-MEXP-265-raw-cel-414618693---
129.099.9ArrayExpressE-MEXP-265-raw-cel-414618491---
115.599.9GSM131656ATGE_27_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
113.999.9GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
107.799.9GSM131657ATGE_27_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
107.299.9ArrayExpressE-MEXP-265-raw-cel-414618291---
94.999.9ArrayExpressE-MEXP-265-raw-cel-414618796---
86.899.9GSM133754Turner_A-8-Turne-WT-Base2_SLDGSE5729Role of COV in vascular patterningLink to GEO
79.999.9ArrayExpressE-MEXP-265-raw-cel-414618585---
76.399.9GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
75.599.9ArrayExpressE-MEXP-265-raw-cel-414617783---
67.199.8GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination StudyLink to GEO
63.699.8GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination StudyLink to GEO
61.599.8GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
57.299.8GSM128785Somerville_1-8_stem-GC7_Rep1_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
54.099.8ArrayExpressE-MEXP-265-raw-cel-414617695---
53.099.8GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
49.999.8ArrayExpressE-MEXP-265-raw-cel-414617890---
49.999.8GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
47.999.8GSM133753Turner_A-7-Turne-WT-Base1_SLDGSE5729Role of COV in vascular patterningLink to GEO
46.299.8GSM27362WT StemGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
45.399.8GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
43.599.8GSM128786Somerville_1-9_stem-GC8_Rep2_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
35.399.7GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
33.999.7ArrayExpressE-MEXP-1451-raw-cel-1585200362---
30.299.7GSM128787Somerville_1-10_stem-GH7_Rep1_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
27.199.7GSM131660ATGE_28_C2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
26.299.7ArrayExpressE-MEXP-546-raw-cel-863289424---
26.199.7GSM27366lec1-1 StemGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
25.399.6GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
24.499.6ArrayExpressE-MEXP-546-raw-cel-863289586---
24.299.6GSM131658ATGE_28_A2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
23.699.6GSM133750Turner_A-4-Turne-Mut-Base2_SLDGSE5729Role of COV in vascular patterningLink to GEO
23.399.6GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
23.399.6GSM131659ATGE_28_B2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
22.999.6GSM275643flu_2hGSE10876Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastidsLink to GEO
22.499.6ArrayExpressE-MEXP-449-raw-cel-676423253---
21.799.6GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
21.699.6GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
20.599.6ArrayExpressE-MEXP-739-raw-cel-1099467321---
20.499.6GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.799.6GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
19.299.6ArrayExpressE-MEXP-546-raw-cel-863289532---
18.599.5GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.299.5GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.099.5GSM133749Turner_A-3-Turne-Mut-Base1_SLDGSE5729Role of COV in vascular patterningLink to GEO
17.499.5GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.899.5ArrayExpressE-MEXP-285-raw-cel-440783213---
16.899.5ArrayExpressE-MEXP-546-raw-cel-863289476---
16.699.5GSM128788Somerville_1-11_stem-GH8_Rep2_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
16.599.5GSM184920Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
16.399.5GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
16.399.5GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.999.5ArrayExpressE-MEXP-546-raw-cel-863289693---
15.999.5ArrayExpressE-MEXP-265-raw-cel-414618093---
15.599.5GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
15.099.4ArrayExpressE-MEXP-285-raw-cel-440783152---
14.699.4GSM1330462788GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
14.499.4GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
14.299.4GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.599.4GSM133818Yang_1-3_young-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
13.399.4GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
12.599.3GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.599.3GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.999.3ArrayExpressE-MEXP-1451-raw-cel-1585200330---
11.699.3GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.999.2GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
10.999.2ArrayExpressE-MEXP-739-raw-cel-1099467276---
10.799.2ArrayExpressE-MEXP-265-raw-cel-414619001---
10.799.2GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
10.699.2ArrayExpressE-MEXP-265-raw-cel-414619106---
10.699.2GSM1330542796GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.599.2GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
10.599.2GSM266666Arabidopsis, root cells, columella root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
10.499.2ArrayExpressE-MEXP-739-raw-cel-1099467285---
9.899.1ArrayExpressE-MEXP-98-raw-cel-320188859---
9.899.1GSM1330532794GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.699.1GSM184921Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.099.1GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.099.1GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
8.999.0ArrayExpressE-MEXP-739-raw-cel-1099467240---
8.999.0GSM184892Arabidopsis, root cells, columella root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
8.899.0GSM1330412525GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
8.799.0GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO



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