Specifically-expressed experiments

Gene ID At1g13400
Gene name NUB (NUBBIN)
Functional description Along with JAG, it is involved in stamen and carpel development. Expression is limited to the adaxial side of lateral organs. Activated by AGAMOUS in a cal-1, ap1-1 background.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
316.0100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
155.799.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
135.999.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
129.699.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
124.999.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
119.199.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
112.599.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
110.099.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
103.999.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
97.399.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
92.399.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
89.399.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
87.799.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
84.999.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
69.799.9ArrayExpressE-MEXP-728-raw-cel-1062074361---
69.199.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
64.199.8GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
63.599.8GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
62.899.8ArrayExpressE-MEXP-728-raw-cel-1062074264---
62.099.8GSM189112HSP90_Reduced_RNAi-A3_Biological_Replicate_2_Technical_Replicate_1GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
56.599.8ArrayExpressE-MEXP-728-raw-cel-1062074303---
51.599.8ArrayExpressE-MEXP-728-raw-cel-1062073338---
50.999.8ArrayExpressE-MEXP-728-raw-cel-1062074409---
49.099.8ArrayExpressE-MEXP-728-raw-cel-1062074226---
48.499.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
42.599.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
37.099.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
36.499.7ArrayExpressE-MEXP-728-raw-cel-1062074471---
34.999.7ArrayExpressE-MEXP-728-raw-cel-1062074577---
33.899.7ArrayExpressE-MEXP-728-raw-cel-1062074512---
31.999.7ArrayExpressE-MEXP-728-raw-cel-1062074005---
30.799.7ArrayExpressE-MEXP-728-raw-cel-1062074538---
30.099.7GSM176878AWP_AL_Txed_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
29.799.7ArrayExpressE-MEXP-728-raw-cel-1062074653---
28.299.7ArrayExpressE-MEXP-728-raw-cel-1062074718---
27.699.7ArrayExpressE-MEXP-728-raw-cel-1062073467---
27.299.7ArrayExpressE-MEXP-728-raw-cel-1062073253---
27.099.7ArrayExpressE-MEXP-728-raw-cel-1062074608---
26.099.7GSM133779Lindsey_1-5_globular-basal_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
25.899.7GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
25.799.7GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
24.999.6GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
24.399.6ArrayExpressE-MEXP-728-raw-cel-1062074758---
24.199.6ArrayExpressE-MEXP-728-raw-cel-1062074684---
22.699.6ArrayExpressE-MEXP-682-raw-cel-922397560---
21.899.6ArrayExpressE-MEXP-682-raw-cel-922397577---
21.399.6GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
20.399.6ArrayExpressE-MEXP-728-raw-cel-1062073408---
19.599.6ArrayExpressE-MEXP-728-raw-cel-1062073942---
18.099.5ArrayExpressE-MEXP-728-raw-cel-1062073825---
16.699.5ArrayExpressE-MEXP-728-raw-cel-1062073620---
15.999.5ArrayExpressE-MEXP-728-raw-cel-1062073902---
15.599.5GSM133919Weigel_2-11_CHIP-206-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
15.599.5ArrayExpressE-TABM-19-raw-cel-489757257---
13.599.4GSM131106Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)Link to GEO
13.599.4ArrayExpressE-MEXP-728-raw-cel-1062074155---
13.499.4ArrayExpressE-TABM-19-raw-cel-489757344---
13.499.4GSM133924Weigel_2-16_CHIP-208-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
13.299.4GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
13.199.4GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
13.099.4ArrayExpressE-TABM-19-raw-cel-489757278---
13.099.4GSM133920Weigel_2-12_CHIP-206-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
12.999.3ArrayExpressE-TABM-19-raw-cel-489757215---
12.999.3GSM133918Weigel_2-10_CHIP-206-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
12.999.3ArrayExpressE-TABM-19-raw-cel-489757392---
12.999.3GSM133926Weigel_2-18_CHIP-208-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
12.799.3ArrayExpressE-TABM-19-raw-cel-489756980---
12.799.3GSM133938Weigel_2-30_CHIP-212-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
12.799.3GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
12.399.3GSM133959Fukuda_1-4_2B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
12.099.3GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
11.999.3ArrayExpressE-TABM-19-raw-cel-489757374---
11.999.3GSM133925Weigel_2-17_CHIP-208-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
11.899.3ArrayExpressE-TABM-19-raw-cel-489757157---
11.899.3GSM133916Weigel_2-8_CHIP-205-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
11.299.2ArrayExpressE-MEXP-728-raw-cel-1062073561---
11.199.2ArrayExpressE-MEXP-728-raw-cel-1062074089---
10.799.2ArrayExpressE-TABM-19-raw-cel-489756936---
10.799.2GSM133937Weigel_2-29_CHIP-212-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
10.799.2ArrayExpressE-ATMX-24-raw-cel-1441078286---
10.199.2GSM133933Weigel_2-25_CHIP-211-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
10.199.2ArrayExpressE-TABM-19-raw-cel-489757545---
9.899.1ArrayExpressE-TABM-19-raw-cel-489757298---
9.899.1GSM133921Weigel_2-13_CHIP-207-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
9.699.1ArrayExpressE-MEXP-509-raw-cel-829148561---
9.699.1ArrayExpressE-MEXP-728-raw-cel-1062073688---
9.599.1ArrayExpressE-TABM-19-raw-cel-489757129---
9.599.1GSM133915Weigel_2-7_CHIP-205-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
9.599.1GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
9.499.1GSM131105Broadley_1-3_A3-Bo-P2-phosphate-starved_Rep2_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)Link to GEO
9.299.1GSM133922Weigel_2-14_CHIP-207-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
9.299.1ArrayExpressE-TABM-19-raw-cel-489757322---
9.099.1GSM133934Weigel_2-26_CHIP-211-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
9.099.1ArrayExpressE-TABM-19-raw-cel-489757569---
8.999.0ArrayExpressE-TABM-19-raw-cel-489757590---
8.999.0GSM133935Weigel_2-27_CHIP-211-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO



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