Specifically-expressed experiments

Gene ID At1g12520
Gene name ATCCS (COPPER CHAPERONE FOR SOD1)
Functional description Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
32.099.7GSM183506WT_for_MYB29/76_rep3GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
19.299.6ArrayExpressE-ATMX-27-raw-cel-1441080444---
17.099.5ArrayExpressE-MEXP-1299-raw-cel-1519902420---
15.299.4ArrayExpressE-ATMX-27-raw-cel-1441080412---
15.199.4ArrayExpressE-MEXP-1299-raw-cel-1519902336---
14.299.4ArrayExpressE-MEXP-1299-raw-cel-1519901992---
13.899.4ArrayExpressE-MEXP-1299-raw-cel-1519902780---
13.499.4GSM184151ATR1_OE_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
12.499.3ArrayExpressE-MEXP-1299-raw-cel-1519902698---
12.199.3GSM318331EL_14DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
11.899.3ArrayExpressE-ATMX-27-raw-cel-1441080428---
11.299.2GSM183513MYB29_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
10.899.2ArrayExpressE-TABM-18-raw-cel-489542938---
10.799.2GSM226281YHB_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
10.599.2GSM134306Penfield_1-8_endosperm-PAC_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
10.499.2ArrayExpressE-MEXP-1299-raw-cel-1519902620---
10.399.2ArrayExpressE-TABM-18-raw-cel-489542972---
10.099.2GSM152138Col-0 control 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.999.1ArrayExpressE-MEXP-1299-raw-cel-1519903848---
9.999.1GSM318332ML_35DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
9.899.1GSM152134Col-0 control 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.899.1GSM152136Col-0 control 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.899.1GSM31919635S-MIF1 line#127, light grownGSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
9.899.1GSM183505WT_for_MYB29/76_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
9.799.1GSM183515ATR1_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
9.699.1GSM142814SS002_ATH1_A6-smith-12hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
9.699.1ArrayExpressE-TABM-18-raw-cel-489543105---
9.699.1GSM183504WT_for_MYB29/76_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
9.599.1GSM134305Penfield_1-7_endosperm-PAC_Rep1_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
9.599.1GSM152140siz1-3 control 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.599.1GSM183511MYB76_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
9.399.1ArrayExpressE-ATMX-19-raw-cel-1375547411---
9.299.1GSM317624Apex_14DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
9.199.1GSM318330EL_14DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
9.099.1GSM152144siz1-3 control 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.099.1ArrayExpressE-MEXP-1304-raw-cel-1530620552---
8.999.0ArrayExpressE-ATMX-25-raw-cel-1441077420---
8.999.0ArrayExpressE-TABM-18-raw-cel-489543478---
8.899.0ArrayExpressE-MEXP-1304-raw-cel-1530620375---
8.899.0GSM183514MYB29_OE_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
8.899.0ArrayExpressE-TABM-18-raw-cel-489543219---
8.899.0GSM133826Walters_A-05-Kruger-WH2_REP2GSE5737Carbohydrate- and redox-regulation of gene expression in a TPT mutantLink to GEO
8.899.0GSM183516MYB51_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
8.799.0ArrayExpressE-TABM-18-raw-cel-489542989---



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