Specifically-expressed experiments

Gene ID At1g08320
Gene name bZIP family transcription factor
Functional description F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
110.199.9GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
99.599.9GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
78.599.9GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
76.399.9GSM75519slr-1 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
57.999.8ArrayExpressE-MEXP-828-raw-cel-1156922684---
49.799.8ArrayExpressE-MEXP-828-raw-cel-1156922572---
48.699.8GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
48.399.8GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
48.199.8GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
46.899.8GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
46.599.8GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
45.399.8GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
44.799.8GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
44.799.8ArrayExpressE-MEXP-828-raw-cel-1156922368---
40.099.8ArrayExpressE-MEXP-828-raw-cel-1156922613---
37.999.8ArrayExpressE-MEXP-828-raw-cel-1156922318---
37.599.7GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
35.199.7ArrayExpressE-MEXP-828-raw-cel-1156922342---
33.199.7ArrayExpressE-MEXP-828-raw-cel-1156922553---
32.599.7GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
30.399.7GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
30.099.7GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
28.899.7ArrayExpressE-MEXP-828-raw-cel-1156922595---
28.199.7GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
27.899.7ArrayExpressE-MEXP-828-raw-cel-1156922809---
27.799.7ArrayExpressE-MEXP-828-raw-cel-1156922634---
27.599.7ArrayExpressE-MEXP-828-raw-cel-1156922731---
27.599.7GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
27.099.7GSM75508Col-0 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
27.099.7GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
27.099.7ArrayExpressE-MEXP-828-raw-cel-1156922296---
25.699.7ArrayExpressE-MEXP-828-raw-cel-1156922905---
25.399.6ArrayExpressE-MEXP-828-raw-cel-1156922772---
24.599.6ArrayExpressE-MEXP-828-raw-cel-1156922750---
24.499.6GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
22.599.6ArrayExpressE-MEXP-722-raw-cel-1062242948---
21.799.6GSM131564ATGE_94_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
21.699.6GSM131565ATGE_94_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
21.599.6GSM265469Arabidopsis, whole roots, -Fe, 24 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
21.399.6ArrayExpressE-MEXP-828-raw-cel-1156922794---
21.299.6GSM157324Hammond_3-17_Potassium-starved-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
20.899.6ArrayExpressE-MEXP-828-raw-cel-1156922386---
20.899.6ArrayExpressE-MEXP-722-raw-cel-1062243390---
20.799.6ArrayExpressE-MEXP-828-raw-cel-1156922416---
20.399.6GSM142723CH001_ATH1_A002-Hampt-akaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
19.999.6ArrayExpressE-MEXP-828-raw-cel-1156922467---
19.999.6ArrayExpressE-MEXP-722-raw-cel-1062243183---
18.899.5ArrayExpressE-MEXP-722-raw-cel-1062243470---
18.499.5GSM75518slr-1 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
17.499.5ArrayExpressE-MEXP-828-raw-cel-1156922438---
16.899.5GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
16.799.5GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
16.799.5ArrayExpressE-MEXP-828-raw-cel-1156922829---
16.699.5GSM131566ATGE_94_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
16.599.5ArrayExpressE-MEXP-722-raw-cel-1062243108---
16.499.5ArrayExpressE-MEXP-635-raw-cel-912819840---
16.299.5ArrayExpressE-MEXP-828-raw-cel-1156922708---
16.299.5GSM157326Hammond_3-10_Control-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
15.699.5ArrayExpressE-MEXP-828-raw-cel-1156922659---
15.699.5GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
15.499.5GSM265470Arabidopsis, whole roots, -Fe, 24 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
15.199.4GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
14.699.4GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.199.4GSM142726CH001_ATH1_A005-Hampt-wsb_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
13.799.4ArrayExpressE-MEXP-828-raw-cel-1156922485---
13.599.4GSM142729CH001_ATH1_A008-Hampt-c1bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
13.499.4GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
13.399.4ArrayExpressE-MEXP-722-raw-cel-1062243559---
13.399.4GSM142724CH001_ATH1_A003-Hampt-c4a_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
13.299.4GSM157327Hammond_3-11_Potassium-starved-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
13.299.4ArrayExpressE-MEXP-722-raw-cel-1062242857---
13.299.4ArrayExpressE-MEXP-828-raw-cel-1156922455---
13.199.4ArrayExpressE-MEXP-722-raw-cel-1062243516---
13.199.4GSM157325Hammond_3-18_Caesium-treated-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
12.999.3GSM291124root - 21% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.899.3GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.899.3GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
12.899.3GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
12.499.3GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
12.499.3GSM265461Arabidopsis, whole roots, standard conditions, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
12.299.3GSM142733CH001_ATH1_A012-Hampt-c1cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
12.299.3GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.199.3GSM265466Arabidopsis, whole roots, -Fe, 6 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
12.099.3GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.999.3ArrayExpressE-MEXP-828-raw-cel-1156922968---
11.899.3ArrayExpressE-MEXP-828-raw-cel-1156922533---
11.799.3GSM265468Arabidopsis, whole roots, -Fe, 12 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
11.799.3GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
11.799.3GSM265467Arabidopsis, whole roots, -Fe, 12 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
11.799.3GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
11.599.3ArrayExpressE-MEXP-722-raw-cel-1062243239---
11.499.3GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.299.2GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.299.2GSM133893Schroeder_1-9_JS46-starve-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
11.199.2GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
11.199.2ArrayExpressE-MEXP-828-raw-cel-1156922846---
10.999.2GSM157336Coates_1-8_ara1/2mut_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.899.2GSM266671Arabidopsis, root cells, cortex, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
10.899.2GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
10.599.2ArrayExpressE-MEXP-828-raw-cel-1156922987---
10.599.2GSM142721CH001_ATH1_A001-Hampt-wsaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
10.599.2GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
10.599.2GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
10.499.2GSM134301Penfield_1-3_endosperm-control_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
10.499.2ArrayExpressE-MEXP-635-raw-cel-912819824---
10.199.2GSM131214AtGen_D-48_3-WS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.999.1GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
9.999.1GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
9.799.1ArrayExpressE-MEXP-722-raw-cel-1062243314---
9.799.1GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.799.1GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
9.699.1ArrayExpressE-MEXP-828-raw-cel-1156922509---
9.699.1GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.699.1ArrayExpressE-MEXP-722-raw-cel-1062243429---
9.599.1GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.399.1ArrayExpressE-MEXP-828-raw-cel-1156922872---
9.399.1GSM157335Coates_1-7_Col-3_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.199.1GSM142732CH001_ATH1_A011-Hampt-c4cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.199.1GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.999.0ArrayExpressE-MEXP-637-raw-cel-913038965---
8.899.0GSM133891Schroeder_1-3_JS45-control-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
8.899.0GSM133131S1500_0H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
8.899.0GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
8.899.0GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.899.0GSM157307Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
8.799.0ArrayExpressE-MEXP-828-raw-cel-1156922944---
8.799.0ArrayExpressE-MEXP-828-raw-cel-1156922923---
8.699.0GSM131571ATGE_98_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO



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