Specifically-expressed experiments

Gene ID	At1g05650
Gene name	polygalacturonase, putative / pectinase, putative
Functional description	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
256.6	100.0	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
233.9	100.0	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
219.9	100.0	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
213.5	100.0	GSM265423	Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
199.3	100.0	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
189.6	100.0	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
179.4	100.0	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
154.0	99.9	GSM184836	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6	GSE7639	Expression analysis of root developmental zones after treatment with salt
131.1	99.9	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
122.5	99.9	GSM184921	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
102.4	99.9	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
96.4	99.9	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
87.2	99.9	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
76.3	99.9	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
68.9	99.9	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
65.6	99.8	GSM218292	At_Standard_cpctry-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
62.7	99.8	GSM265428	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
59.9	99.8	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
52.4	99.8	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
50.8	99.8	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
49.5	99.8	GSM252692	Section of Root from 270 mm to 340 mm harvested immediately rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
48.6	99.8	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
47.7	99.8	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
44.3	99.8	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
43.4	99.8	GSM184903	Arabidopsis, root cells, stele, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
42.1	99.8	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
41.4	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
41.0	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
39.9	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.8	99.8	GSM133978	Birnbaum_1-8_StageII-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
39.7	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
38.7	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
38.3	99.8	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
37.1	99.7	GSM218291	At_Standard_cpctry-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
36.4	99.7	GSM252691	Section of Root from 270 mm to 340 mm harvested immediately rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
31.6	99.7	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
30.5	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
30.3	99.7	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
30.3	99.7	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
30.1	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.8	99.7	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.4	99.7	GSM252675	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
28.2	99.7	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.7	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.5	99.7	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3	99.7	GSM184842	Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
27.2	99.7	GSM184841	Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
27.1	99.7	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
26.9	99.7	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
26.3	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.1	99.7	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.9	99.7	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
25.7	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.7	99.7	GSM218293	At_NaCl_cpctry-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
25.6	99.7	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
25.2	99.6	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.8	99.6	GSM266675	Arabidopsis, root cells, stele, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
24.8	99.6	GSM184924	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
24.3	99.6	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
23.8	99.6	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
23.1	99.6	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
22.8	99.6	GSM266676	Arabidopsis, root cells, stele, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
22.1	99.6	GSM184915	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
21.5	99.6	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
21.5	99.6	GSM252668	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
20.3	99.6	GSM218298	At_NaCl_scm-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
20.2	99.6	GSM218296	At_Standard_scm-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
19.7	99.6	GSM218294	At_NaCl_cpctry-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
19.5	99.6	GSM291101	root - 21% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
19.2	99.6	GSM218288	At_Standard_wermyb23-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
19.0	99.5	GSM226536	L6SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
18.8	99.5	GSM265414	Arabidopsis, root cells, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
18.5	99.5	GSM252690	Section of Root from 270 mm to 340 mm harvested immediately rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
18.0	99.5	GSM226537	L7SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.8	99.5	GSM218297	At_NaCl_scm-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
17.5	99.5	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
17.1	99.5	GSM218295	At_Standard_scm-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
16.7	99.5	GSM184933	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
16.5	99.5	GSM252681	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
16.2	99.5	GSM218283	At_Standard_Col-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
15.6	99.5	GSM179959	Arabidopsis roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.7	99.4	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
14.2	99.4	GSM218285	At_NaCl_Col-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
14.1	99.4	GSM133988	Birnbaum_1-18_wol-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
13.8	99.4	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
13.4	99.4	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
13.3	99.4	GSM184935	Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
13.2	99.4	GSM265421	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.1	99.4	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
12.9	99.3	GSM218287	At_Standard_wermyb23-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
12.1	99.3	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
11.7	99.3	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
11.4	99.3	GSM218284	At_Standard_Col-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
11.3	99.3	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.1	99.2	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
11.0	99.2	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
10.8	99.2	GSM184931	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
10.5	99.2	GSM179967	Arabidopsis aux1 mutant roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.3	99.2	GSM184932	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
10.0	99.2	GSM266669	Arabidopsis, root cells, cortex, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.0	99.2	GSM291113	root - 21% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.7	99.1	GSM291108	root - 21% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.7	99.1	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.6	99.1	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.6	99.1	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.5	99.1	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.4	99.1	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.2	99.1	GSM291020	root - 08% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.2	99.1	GSM184834	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4	GSE7639	Expression analysis of root developmental zones after treatment with salt
8.6	99.0	GSM218289	At_NaCl_wermyb23-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning

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