Specifically-expressed experiments

Gene ID	At1g04250
Gene name	AXR3 (AUXIN RESISTANT 3)
Functional description	Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
47.2	99.8	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
44.3	99.8	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
40.0	99.8	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
35.2	99.7	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
32.3	99.7	GSM133957	Fukuda_1-2_0B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
30.0	99.7	GSM292077	Wt, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
28.4	99.7	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
27.7	99.7	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
27.6	99.7	GSM131180	AtGen_D-12_1-RS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
26.8	99.7	GSM292078	Wt, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
26.5	99.7	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
26.2	99.7	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
25.4	99.6	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
25.3	99.6	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
24.5	99.6	GSM131211	AtGen_D-45_3-BS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
24.2	99.6	GSM131212	AtGen_D-46_3-AS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
24.2	99.6	GSM131182	AtGen_D-14_1-AS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
24.1	99.6	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
24.1	99.6	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
23.6	99.6	GSM131181	AtGen_D-13_1-BS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
23.3	99.6	GSM131174	AtGen_D-6_1-AL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
23.0	99.6	GSM131193	AtGen_D-27_2-PS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
23.0	99.6	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
23.0	99.6	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
23.0	99.6	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
22.8	99.6	GSM131195	AtGen_D-29_2-BS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
22.5	99.6	GSM131197	AtGen_D-31_2-US_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
22.1	99.6	GSM131198	AtGen_D-32_2-WS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
22.0	99.6	GSM131171	AtGen_D-3_1-PL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
21.9	99.6	GSM131196	AtGen_D-30_2-AS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
21.6	99.6	GSM184836	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6	GSE7639	Expression analysis of root developmental zones after treatment with salt
21.6	99.6	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
21.5	99.6	GSM131215	AtGen_D-17_2-DL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
21.5	99.6	ArrayExpress	E-MEXP-1784-raw-cel-1661573074	-	-	-
21.3	99.6	GSM131214	AtGen_D-48_3-WS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
21.2	99.6	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
20.4	99.6	GSM292080	pif1-2, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
20.3	99.6	GSM131213	AtGen_D-47_3-US_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
20.2	99.6	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
20.1	99.6	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
19.9	99.6	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
19.8	99.6	GSM131194	AtGen_D-28_2-RS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
19.6	99.6	GSM292079	pif1-2, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
19.6	99.6	GSM131172	AtGen_D-4_1-RL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
19.6	99.6	GSM292081	pif1-2, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
19.3	99.6	GSM131184	AtGen_D-16_1-WS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
19.2	99.6	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
19.1	99.6	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
19.1	99.6	GSM292076	Wt, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
19.1	99.6	GSM131187	AtGen_D-20_2-RL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
18.6	99.5	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
18.5	99.5	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
18.1	99.5	GSM131176	AtGen_D-8_1-WL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.9	99.5	GSM131170	AtGen_D-2_1-FL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.9	99.5	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
17.7	99.5	GSM131216	AtGen_D-26_1-FS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.5	99.5	GSM265423	Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
17.4	99.5	GSM266669	Arabidopsis, root cells, cortex, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
17.0	99.5	ArrayExpress	E-MEXP-1784-raw-cel-1661572965	-	-	-
17.0	99.5	GSM131173	AtGen_D-5_1-BL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
16.9	99.5	ArrayExpress	E-MEXP-1784-raw-cel-1661572909	-	-	-
16.7	99.5	ArrayExpress	E-MEXP-1784-raw-cel-1661573096	-	-	-
16.5	99.5	GSM131206	AtGen_D-40_3-WL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.4	99.5	GSM131185	AtGen_D-18_2-FL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
16.4	99.5	GSM131203	AtGen_D-37_3-BL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.4	99.5	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.3	99.5	GSM131175	AtGen_D-7_1-UL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
16.2	99.5	GSM131191	AtGen_D-24_2-WL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
16.0	99.5	GSM131202	AtGen_D-36_3-RL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.0	99.5	ArrayExpress	E-MEXP-1784-raw-cel-1661573032	-	-	-
16.0	99.5	GSM131205	AtGen_D-39_3-UL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
15.7	99.5	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
15.5	99.5	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
15.4	99.5	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.2	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661573160	-	-	-
15.0	99.4	GSM184504	Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.4	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661572952	-	-	-
14.1	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661573117	-	-	-
14.0	99.4	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.7	99.4	GSM131189	AtGen_D-22_2-AL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.4	99.4	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
13.4	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661572978	-	-	-
13.2	99.4	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.1	99.4	GSM131188	AtGen_D-21_2-BL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.0	99.4	GSM131200	AtGen_D-34_3-FL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
12.9	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661573173	-	-	-
12.7	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661573005	-	-	-
12.6	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121836247	-	-	-
12.6	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661573138	-	-	-
12.5	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661572930	-	-	-
12.3	99.3	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
12.2	99.3	GSM134517	Col-0_4day_red illumination_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
12.2	99.3	GSM134513	Col-0_4day_dark_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
11.9	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661572992	-	-	-
11.9	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661573186	-	-	-
11.9	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661573053	-	-	-
11.9	99.3	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.8	99.3	GSM134514	Col-0_4day_dark_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
11.8	99.3	GSM131190	AtGen_D-23_2-UL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
11.7	99.3	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
11.7	99.3	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.5	99.3	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.2	99.2	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
11.2	99.2	ArrayExpress	E-MEXP-1784-raw-cel-1661572888	-	-	-
11.0	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138853	-	-	-
10.9	99.2	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.8	99.2	GSM266676	Arabidopsis, root cells, stele, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.7	99.2	ArrayExpress	E-MEXP-715-raw-cel-1121835979	-	-	-
10.7	99.2	GSM184507	Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.5	99.2	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.3	99.2	ArrayExpress	E-MEXP-1784-raw-cel-1661573018	-	-	-
10.0	99.2	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.9	99.1	GSM134519	Col-0_4day_red illumination_+lincomycin_rep1	GSE5759	red illumination w/o lincomycin
9.7	99.1	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.7	99.1	GSM67087	Arabidopsis_Stigma03	GSE3056	Arabidopsis Pollination Study
9.6	99.1	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.5	99.1	ArrayExpress	E-MEXP-1304-raw-cel-1530618235	-	-	-
9.4	99.1	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
9.4	99.1	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.2	99.1	ArrayExpress	E-MEXP-1112-raw-cel-1590665533	-	-	-
9.0	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836087	-	-	-
9.0	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138688	-	-	-
8.9	99.0	ArrayExpress	E-MEXP-1468-raw-cel-1591138919	-	-	-

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