CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID rbah44m04_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 80.3 rbah44m04_s_at rbah44m04 - - 2e+0 At1g32560 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein S.X. H.G.
0.74 89.1 Contig3576_at Contig3576 - - 1e-8 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) S.X. H.G.
0.63 80.3 Contig9167_at Contig9167 - - 2e-4 At5g64550 loricrin-related S.X. H.G.
0.57 74.9 Contig4674_at Contig4674 - - 5e-2 At1g51680 4CL1 (4-COUMARATE:COA LIGASE 1) S.X. H.G.
0.47 62.2 Contig18939_at Contig18939 - - 3e-2 At4g35700 zinc finger (C2H2 type) family protein S.X. H.G.
0.46 61.0 Contig5523_at Contig5523 - - 4e-8 At5g10480 PAS2 (PASTICCINO 2) S.X. H.G.
0.33 42.6 rbaal33b21_s_at rbaal33b21 - - 7e+0 At5g24155 squalene monooxygenase, putative / squalene epoxidase, putative S.X. H.G.
0.30 37.0 Contig18407_at Contig18407 - - 2e+0 At3g50450 HR1 (HOMOLOG OF RPW8 1) S.X. H.G.
0.29 35.5 HVSMEl0016M22r2_at HVSMEl0016M22r2 - - 1e+0 At1g58180 carbonic anhydrase family protein / carbonate dehydratase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.8 99.5 GSM440968 Stressed palea_Rep3 GSE17669 Gene expression in the barley spike during drought stress
14.1 99.5 GSM440967 Stressed palea_Rep2 GSE17669 Gene expression in the barley spike during drought stress
11.7 99.3 GSM440972 Stressed awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
10.6 99.2 GSM440960 Stressed lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
10.4 99.2 GSM440966 Stressed palea_Rep1 GSE17669 Gene expression in the barley spike during drought stress
9.5 99.0 GSM440962 Stressed lemma_Rep3 GSE17669 Gene expression in the barley spike during drought stress
7.3 98.5 GSM440973 Stressed awn_Rep2 GSE17669 Gene expression in the barley spike during drought stress
7.3 98.5 GSM440974 Stressed awn_Rep3 GSE17669 Gene expression in the barley spike during drought stress
7.2 98.5 GSM238415 Endosperm 8DAF; Seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
6.9 98.3 GSM398281 Moroc9-75_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.49 6e-138 488 Contig5141_at Contig5141 - - 3e-5 At5g15450 CLPB3 (CASEIN LYTIC PROTEINASE B3) C.G. S.X.
0.02 7e-2 36 Contig3168_at Contig3168 - - 1e-24 At5g60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f) C.G. S.X.
0.02 1e+0 32 Contig14958_at Contig14958 - - 7e-1 At1g48960 universal stress protein (USP) family protein C.G. S.X.
0.03 1e+0 32 Contig16099_at Contig16099 - - 8e+0 At5g28800 unknown protein C.G. S.X.
0.02 1e+0 32 Contig12064_at Contig12064 - - 6e-1 At4g31020 unknown protein C.G. S.X.
0.02 4e+0 30 Contig9376_at Contig9376 - - 1e-11 At5g02810 PRR7 (PSEUDO-RESPONSE REGULATOR 7) C.G. S.X.
0.03 4e+0 30 Contig17438_at Contig17438 - - 4e-1 At1g11190 BFN1 (BIFUNCTIONAL NUCLEASE I) C.G. S.X.
0.02 4e+0 30 Contig5879_at Contig5879 - - 8e-1 At4g35630 PSAT C.G. S.X.
0.04 4e+0 30 EBan01_SQ005_B08_at EBan01_SQ005_B08 - - 9e-1 At2g34010 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e+0 32 Arabidopsis thaliana At1g32560 840150 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy, embryonic development;C:cellular_component unknown;PMO - - - C.G. S.X.
0.04 3e+0 32 Glycine max PsAffx.CL1861Contig1_at PsAffx.CL1861Contig1 - - 8e-1 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.06 7e-5 48 Oryza sativa Os.7626.1.S1_at - - - 0 C.G. S.X.
0.04 2e-1 36 Populus trichocarpa PtpAffx.205950.1.S1_at pmrna11809 hypothetical protein - 5e+0 At5g04980 endonuclease/exonuclease/phosphatase family protein C.G. S.X.
0.25 6e-81 299 Triticum aestivum Ta.9115.1.S1_at CD899939 - - 7e-11 At5g15450 CLPB3 (CASEIN LYTIC PROTEINASE B3) C.G. S.X.
0.04 7e-1 32 Vitis vinifera 1611954_at CF516533 hypothetical protein LOC100250957 - 1e+0 At4g08260 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.13 3e-7 54 Zea mays Zm.2808.1.A1_at AY107812.1 - - 3e-5 At5g15450 CLPB3 (CASEIN LYTIC PROTEINASE B3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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