Gene omics information

Query gene ID	rbah33e14_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	88.7	rbah33e14_s_at	rbah33e14	-	-	4e+0	At5g22580	-	S.X.	H.G.	Please select
0.67	84.7	Contig24918_at	Contig24918	-	-	1e+1	At4g29850	unknown protein	S.X.	H.G.	Please select
0.60	77.3	rbah33e14_at	rbah33e14	-	-	4e+0	At5g22580	-	S.X.	H.G.	Please select
0.55	72.0	Contig20831_at	Contig20831	-	-	1e+0	At3g48890	ATMP2	S.X.	H.G.	Please select
0.30	37.0	Contig2318_at	Contig2318	-	-	2e+0	At5g40040	60S acidic ribosomal protein P2 (RPP2E)	S.X.	H.G.	Please select
0.13	11.6	Contig18069_at	Contig18069	-	-	2e+0	At2g20635	ATP binding / protein kinase/ protein serine/threonine kinase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.6	99.8	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
15.3	99.6	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.0	99.4	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.9	99.4	GSM372989	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.0	99.3	GSM372987	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.9	99.2	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
9.6	99.0	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.8	98.9	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.4	98.8	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.2	98.7	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1140	rbah33e14_at	rbah33e14	-	-	4e+0	At5g22580	-	C.G.	S.X.	Please select
0.64	0	634	rbaal19f02_at	rbaal19f02	-	-	7e-2	At1g61150	-	C.G.	S.X.	Please select
0.07	1e-7	56	Contig12090_at	Contig12090	-	-	2e-7	At1g36280	adenylosuccinate lyase, putative / adenylosuccinase, putative	C.G.	S.X.	Please select
0.08	6e-7	54	Contig23510_at	Contig23510	-	-	2e+0	At1g03260	-	C.G.	S.X.	Please select
0.03	4e-5	48	Contig7247_at	Contig7247	-	-	1e+0	At5g03545	unknown protein	C.G.	S.X.	Please select
0.04	6e-4	44	Contig11917_at	Contig11917	-	-	4e-1	At4g05497	F-box family protein	C.G.	S.X.	Please select
0.07	6e-4	44	Contig11507_at	Contig11507	-	-	7e-22	At5g19420	Ran GTPase binding / chromatin binding / zinc ion binding	C.G.	S.X.	Please select
0.07	2e-3	42	Contig22316_at	Contig22316	-	-	8e+0	At5g27940	WPP3 (WPP domain protein 3)	C.G.	S.X.	Please select
0.05	2e-3	42	HVSMEn0024P19r2_at	HVSMEn0024P19r2	-	-	2e-2	At5g60020	LAC17 (laccase 17)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At5g22580	832321	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e+0	32	Glycine max	GmaAffx.76968.1.S1_at	BG044476	-	-	3e+0	At2g29870	major intrinsic family protein / MIP family protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os12g0516000	CB966669	-	Hypothetical protein	4e+0	At5g59240	40S ribosomal protein S8 (RPS8B)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.76877.1.S1_at	BI071469	-	-	4e+0	At5g02470	DPA	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.49	4e-62	238	Triticum aestivum	Ta.16134.1.S1_at	CA600576	-	-	4e+0	At3g22275	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	Vitis vinifera	1615521_at	CF209850	-	-	1e+0	At1g16022	unknown protein	C.G.	S.X.	Please select
0.03	8e+0	30	Zea mays	Zm.4720.1.S1_at	AY108931.1	-	-	7e-2	At5g13910	LEP (LEAFY PETIOLE)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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