CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID rbags16k21_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 rbags16k21_s_at rbags16k21 - - 1e+1 At3g51520 diacylglycerol acyltransferase family S.X. H.G.
0.67 84.7 Contig1021_at Contig1021 - - 5e+0 At5g46650 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.40 53.1 Contig4540_at Contig4540 - - 3e-2 At5g17460 unknown protein S.X. H.G.
0.33 42.6 Contig15344_at Contig15344 - - 4e-1 At1g56290 CwfJ-like family protein S.X. H.G.
0.27 32.1 Contig15363_at Contig15363 - - 2e+0 At3g44980 unknown protein S.X. H.G.
0.15 14.1 Contig4137_at Contig4137 - - 2e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.8 97.0 GSM282031 Malting_day1_Harrington_rep1 GSE11200 Expression data from malting barley seeds
4.5 96.7 GSM282028 Malting_day1_Merit_rep1 GSE11200 Expression data from malting barley seeds
4.4 96.6 GSM282027 Malting_day1_Legacy_rep2 GSE11200 Expression data from malting barley seeds
4.1 96.2 GSM282022 Malting_day4_Merit_rep4 GSE11200 Expression data from malting barley seeds
4.1 96.2 GSM282029 Malting_day1_Merit_rep3 GSE11200 Expression data from malting barley seeds
3.8 95.7 GSM146376 Maythorpe shoot Control, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.7 95.5 GSM282024 Malting_day4_Merit_rep2 GSE11200 Expression data from malting barley seeds
3.7 95.5 GSM282021 Malting_day4_Legacy_rep 2 GSE11200 Expression data from malting barley seeds
3.4 94.8 GSM146374 Golden Promise shoot Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.4 94.8 GSM146377 Maythorpe shoot Control, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 1e-139 494 rbags16k21_at rbags16k21 - - 1e+1 At3g51520 diacylglycerol acyltransferase family C.G. S.X.
0.29 4e-93 339 Contig2908_at Contig2908 - - 5e-36 At5g14040 mitochondrial phosphate transporter C.G. S.X.
0.02 1e+0 32 Contig12302_at Contig12302 - - 1e-2 At5g62440 - C.G. S.X.
0.05 1e+0 32 EBem05_SQ004_D02_s_at EBem05_SQ004_D02 - - 2e+0 At3g18773 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 1e+0 32 Contig4540_at Contig4540 - - 3e-2 At5g17460 unknown protein C.G. S.X.
0.03 5e+0 30 Contig41_x_at Contig41 - - 5e-28 At1g09200 histone H3 C.G. S.X.
0.02 5e+0 30 Contig6249_at Contig6249 - - 8e-7 At2g14910 unknown protein C.G. S.X.
0.02 5e+0 30 Contig2737_at Contig2737 - - 9e-1 At4g22100 BGLU3 (BETA GLUCOSIDASE 2) C.G. S.X.
0.03 5e+0 30 Contig2468_at Contig2468 - - 8e-30 At5g28060 40S ribosomal protein S24 (RPS24B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+1 30 Arabidopsis thaliana At3g51520 824315 diacylglycerol acyltransferase family F:diacylglycerol O-acyltransferase activity, transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;MBFOP - - - C.G. S.X.
0.05 6e-2 38 Glycine max PsAffx.C140000034_at PsAffx.C140000034 - - 9e-1 At2g18200 unknown protein C.G. S.X.
0.08 5e-9 61 Oryza sativa Os02g0767500 BI805399 - Mitochondrial phosphate transporter 1e-3 At5g14040 mitochondrial phosphate transporter C.G. S.X.
0.04 9e-1 34 Populus trichocarpa PtpAffx.51910.1.S1_at CK106924 hypothetical protein - 4e-3 At3g05520 F-actin capping protein alpha subunit family protein C.G. S.X.
0.24 1e-26 119 Triticum aestivum Ta.1412.1.S1_at BJ242795 - - 4e-43 At5g14040 mitochondrial phosphate transporter C.G. S.X.
0.06 3e+0 30 Vitis vinifera 1617504_s_at CF202343.1 hypothetical protein LOC100241051 - 1e-28 At2g36170 ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A) C.G. S.X.
0.06 1e-6 52 Zea mays Zm.198.1.S1_at AB016064.1 mitochondrial phosphate transporter - 2e-51 At5g14040 mitochondrial phosphate transporter C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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