CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID rbaal22l07_s_at

Gene name vacuolar ATPase B subunit

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.1 rbaal22l07_s_at rbaal22l07 vacuolar ATPase B subunit - 1e-1 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein S.X. H.G.
0.71 87.1 Contig24657_at Contig24657 - - 2e-2 At5g18940 Mo25 family protein S.X. H.G.
0.67 84.7 Contig4072_at Contig4072 - - 2e+0 At2g31610 40S ribosomal protein S3 (RPS3A) S.X. H.G.
0.50 66.9 Contig3659_at Contig3659 - - 3e-7 At4g29060 emb2726 (embryo defective 2726) S.X. H.G.
0.47 62.2 HD13H12r_s_at HD13H12r - - 2e-1 At3g28710 H+-transporting two-sector ATPase, putative S.X. H.G.
0.36 47.1 Contig3558_s_at Contig3558 - - 2e-15 At1g24510 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 95.8 GSM440961 Stressed lemma_Rep2 GSE17669 Gene expression in the barley spike during drought stress
3.4 94.8 GSM440967 Stressed palea_Rep2 GSE17669 Gene expression in the barley spike during drought stress
3.4 94.8 GSM440972 Stressed awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
3.3 94.6 GSM440973 Stressed awn_Rep2 GSE17669 Gene expression in the barley spike during drought stress
3.2 94.3 GSM398282 Moroc9-75_5d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.1 94.1 GSM398270 HS41-1_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.1 94.1 GSM398258 Martin_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0 93.8 GSM382237 Root_Control3 GSE15295 Mercury toxicity in barley roots
2.9 93.4 GSM440968 Stressed palea_Rep3 GSE17669 Gene expression in the barley spike during drought stress
2.9 93.4 GSM382233 Root_Hg2 GSE15295 Mercury toxicity in barley roots
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 2e-103 373 Contig2464_at Contig2464 vacuolar ATPase B subunit - 2e-156 At1g20260 hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism C.G. S.X.
0.03 9e-1 32 Contig2761_at Contig2761 - - 2e+0 At5g40550 unknown protein C.G. S.X.
0.01 4e+0 30 Contig4942_at Contig4942 - - 7e-14 At5g51070 ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1) C.G. S.X.
0.04 4e+0 30 Contig11328_at Contig11328 - - 4e-6 At1g63090 AtPP2-A11 (Phloem protein 2-A11) C.G. S.X.
0.02 4e+0 30 Contig6865_at Contig6865 - - 2e-7 At4g00360 CYP86A2 (CYTOCHROME P450 86 A2) C.G. S.X.
0.04 4e+0 30 HVSMEk0016H05r2_at HVSMEk0016H05r2 - - 2e-1 At4g16460 unknown protein C.G. S.X.
0.02 4e+0 30 Contig6865_x_at Contig6865 - - 2e-7 At4g00360 CYP86A2 (CYTOCHROME P450 86 A2) C.G. S.X.
0.03 4e+0 30 Contig23260_at Contig23260 - - 2e+0 At1g69818 - C.G. S.X.
0.03 4e+0 30 rbags14a14_s_at rbags14a14 - - 5e-3 At1g58120 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 36 Arabidopsis thaliana At3g44100 823530 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cell wall, vacuole, anchored to membrane;FPO - - - C.G. S.X.
0.06 3e+0 32 Glycine max Gma.1296.1.A1_at BI699661 - - 8e-1 At2g41340 RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, D) C.G. S.X.
0.04 4e+0 32 Oryza sativa Os10g0576000 AK058777.1 - Conserved hypothetical protein 5e-3 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.04 7e-1 34 Populus trichocarpa Ptp.4818.1.S1_at BU812657 - - 3e-1 At5g52420 unknown protein C.G. S.X.
0.23 8e-40 163 Triticum aestivum Ta.1819.1.S1_at CK208579 - - 6e-69 At1g20260 hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism C.G. S.X.
0.05 2e+0 30 Vitis vinifera 1617209_at CB980244 - - 7e-1 At1g71330 ATNAP5 C.G. S.X.
0.05 2e-1 34 Zea mays ZmAffx.437.1.A1_at AI676955 Hypothetical protein LOC100193309 - 3e+0 At2g26130 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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